Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g06037 ATGGCTTTTAAAGCTTGTTCTGAAAAGGAGCTTCAGAAAACTGGTATAAAAGTCTCAAATAGTTTTCCTCTTTCTGGAACTAGTCTTGCATCTTTGGAGTCTTTGTCACTGCCACTGGTGCAGGAGGTTGTTCTTTCTGCAGATATGCAATGTGAGAGCTGTCAGAAGAGAGTTTCTGACATTATTACAAAAATGAATGCAGAGACAGAGTCCATTGTGGTGAATGTATTGGAAAAGAAGGTGATACTTACTTTTAGAATATCATCATCAACAACTGTTGGTAAAGTAAAATCACACCAACTTACTCCAATAAACAAGACTCCTTCTTCCCCTAAAGTTGCCATGATCAAAAGGATATTCCGCTCATCCAATGGTTAA 378 0.3783 MAFKACSEKELQKTGIKVSNSFPLSGTSLASLESLSLPLVQEVVLSADMQCESCQKRVSDIITKMNAETESIVVNVLEKKVILTFRISSSTTVGKVKSHQLTPINKTPSSPKVAMIKRIFRSSNG 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g06037 125 SUPERFAMILY HMA, heavy metal-associated domain 42 98 IPR036163 GO:0046872
Trre1g06037 125 ProSitePatterns Heavy-metal-associated domain. 46 76 IPR017969 GO:0046872
Trre1g06037 125 Gene3D - 39 102 - -
Trre1g06037 125 PANTHER OS08G0431150 PROTEIN 8 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g06037 Trre-Chr1 64662897 64664367 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g06037 - - tpra:123900215 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g06037 1 64662897 64664367 Trre1g06037 1 64662897 64664367 ECH