Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g06033 ATGGTCAGTTTTATTATTATGGAACATTCGGATTCAGAGATTCCTTTTCCCCTTTCTTCCATTACCGAAGCCTTTGAGGATCTCTCCGAAAAGGTTAAGGGAATCAAAAACGGTTCTATCCAACATCTTCGTTTGGATAATTTCTGTGAAATTGCTTCTCTTGTTTCTGTTCTTTTCCGTTGTCTTGGTCTTGCTTTCAAATTTGCTGAAATGGAATACGTTGCTAAGCTGCATGCACTTGTGGAAGCATCAAAGACATATCAGACTCTACAAGATATAATTGACCATGATGTGGCCAATTACAGAGTGAAAACATCAGGGAGCAATTCACGTAATCTACGCAGAGTTCGGCAGGGTCTTGATCTCGTTAGAGCTATATTCGAACAACTTTTGTCAACTAGTGATAGTTATCTAAAGGAAGTGGCTTCAACAGCTTATGCAGAGGTTTGTGCACCGTATCACACATGGGCGGTCAGAACGGCTGTTTATGCTGGAATGTATACGCTTCCGACTAGAGAACAACTTTTTTTAAAGCTCAATGAAACAGAGCAATCAGCAGAGAAAAAGATGAGAAGATACATTTCTGCCTCACTTCCGGTTATAGAATACATTGATAAATTGTACCTTTCTCGAAATATTGTATTGGACTGGTGA 654 0.3945 MVSFIIMEHSDSEIPFPLSSITEAFEDLSEKVKGIKNGSIQHLRLDNFCEIASLVSVLFRCLGLAFKFAEMEYVAKLHALVEASKTYQTLQDIIDHDVANYRVKTSGSNSRNLRRVRQGLDLVRAIFEQLLSTSDSYLKEVASTAYAEVCAPYHTWAVRTAVYAGMYTLPTREQLFLKLNETEQSAEKKMRRYISASLPVIEYIDKLYLSRNIVLDW 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g06033 217 FunFam Accelerated cell death 11 9 217 - -
Trre1g06033 217 Pfam Glycolipid transfer protein (GLTP) 44 181 IPR014830 GO:0005737|GO:0120009|GO:0120013
Trre1g06033 217 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 15 207 IPR014830 GO:0005737|GO:0120009|GO:0120013
Trre1g06033 217 SUPERFAMILY Glycolipid transfer protein, GLTP 42 214 IPR036497 -
Trre1g06033 217 Gene3D Glycolipid transfer protein 9 217 IPR036497 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g06033 Trre-Chr1 64635939 64638142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g06033 17 217 Acyl Lipid Metabolism Gene Families AT4G39670 68.966 3.99e-101 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g06033 - - aprc:113872428 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g06033 1 64635939 64638142 Trre1g06033 1 64635939 64638142 ECH