Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g06027 ATGGTTTTTCTTAGGCCATTACTTACTTTAACTCTCTCTTCCTTTCTTTTAACTTGGTTTCTATGTTTGGCTGAAGAAACCAACTATTCTTCTTCCAAAATTGGTCAAGGTTACCGTTTGATATCCATTGAAGATACCCCTGATGGTGCACTTGTTGGACTCCTCCAAGTTAAGCAGAAGAACAATATTTATGGTGCTGACATTCCCCTTCTATGCTTCTATGTCAAGCACGAGACTGAGAGTCGTTTGAGGGTACACATTACTGATGCAAAGAACAAAAGATGGGAGGTACCATATAATCTTTTGCCAAGGCAACAACCACCGGCTCTTAAACCGAACATTAAGAGGTTAAGAAAGAACTCATTATCGGTATCAGAGTACTCGAGTTCTGAGCTAGTTTTCAGTTACACTTCTGATCCATTTAGCTTTAAAGTAAAAAGAAAGTCCAATGGTGATACCCTTTTTGACACCAATTCTAATAATTCGGACCTTTTTAGTCCATTAGTCTTCAAAGACCAATATTTGGAAATTTCAACCAAATTACCAAAAAATGCTTCTTTGTATGGTTTAGGAGAAAACACACAACCAAATGGATTTAAGTTACATCCAAATGATCCTTACACTTTGTATACAACTGATATATCAGCAGTTAATCTCAATTTTGATTTATATGGATCACATCCTGTATACATGGATCTTAGAAATGAAGGTGGAAAACCTTATGCACATGGTGTTCTTTTGTTGAATAGTAATGGAATGGATGTGTTTTACAAAGGGAATTATTTGACATACAAAATCATTGGAGGTGTTTTTGATTTTTACTTCTTTGCTGGTCCCACTCCTTTGAATGTTGTTGACCAGTACACTGCCTTTGTTGGGAGACCTGCTCCAATGCCTTATTGGGCTTTTGGATTTCACCAATGCAGATGGGGTTATCACAACCTATCTGTGATAGAAGATGTTGTTGAGAATTACAAGAAGGCCAAAATTCCACTTGATGTAATATGGAATGATGATGATCACATGGATGGACACAAGGACTTCACAGTCAATCCAATTAACTATCCACTTCCAAAGCTTTTAAGCTTTTTGGAGAGAATACACAACATTGGCATGAAATACATTGTGATCAATGATCCCGGGATTGCTGTTAATACCAATTATGGTGTATACCAAAGAGGTATAGCTAATGATGTTTTTATCAAGTATGAAGGTGAACCATTCATGGCTATGGTTTGGCCAGGAGCAGTGTACTTTCCTGATTTTCTCAATCCAAAAACAGTTTCTTGGTGGGGTGATGAGATTCGGCGATTCCATGAACTTGTTCCTATTGATGGCTTATGGATTGATATGAATGAAGTTTCAAATTTCTGCACTGGAAAGTGTACTATTCCAAAAGAAAGATTTTGTCCACTTCAAGGAGAAAAGTTACCAAATTCTACATGTTGCTTAGATTGTACAAACATCACAAACACAAGATGGGATGATCCTCCATACAAAATCAATGCTTCAGGAAAAGAGGCTCCAATAGGCTACAAAACTATAGCAACTAGTGCAGTTCATTATAATGGTGTGTTGGAATATGATGCTCATAGTCTTTTCGGTTTCTCTGAAGCCATCGCAACACACAAGGCACTTCATGAACTTCAAGGTAAACGACCATTTGTTTTGTCTCGTTCGACTTATGTAGGATCAGGCAAATACGCAGCTCATTGGACCGGTGACAACAAAGGAACATGGGAGGATTTAAAATATTCTATTTCTACTGTCCTTAATTTTGGAATATTTGGTATGCCAATGGTTGGTGCAGATATTTGTGGTTTCTATCCAGCGCCTACTGAAGAGCTTTGTAATAGGTGGATCGAGGTTGGTGCATTCTATCCTTTCTCAAGGGATCATTCAAGTGTTATTTCTCCTAGACAAGAACTTTACCAATGGGAATCAGTAGCTGAATCAGCTAGAAATGCTTTGGGGATGAGGTATAAGCTCCTCCCCTATTTTTACACCCTAAACTATGAGGCTCATATTAGTGGAGCCCCAATTGCTAGGCCACTTTTCTTCTCATTTCCAAATTATATTCAATCTTATGGCCTCAGCACTCAGTTTTTACTTGGAACCAGTTTAATGATTTCTCCTGTTCTTGAGCAAGGGAAAACAAAAGTTGAAGCACTATTTCCTCCCGGAACATGGTACAGTTTATTTGATTTGACACAAACCATTGTTTCAAAAGATGGATCCTATGTTACCCTTGATGCACCCTTGCATGAAATCAATGTGCATTTATATCAAAATACTATTCTACCAATGCAACAAGGTGGTATGGTATCTAAGGATGCTAGAATGACACCTTTTAGCCTCATTGTTACATTTCCAACAGGTATAAATGAAGGAGAAGCTAAAGGAAACTTGTTCCTCGATGATGACGAGATGCCGGATATGAAGCTTGGAAATGGATATTCAACCTATATTGATTTCCATGCAACCATCAAAGAAGGAACTGTGACAGTTTGGTCAGAAGTTCAAGAGGGAAAGTTTGCTTTGGATAAAGGTTTGGTTATTGACACAATAAATGTGTTAGGATTGAGATATGGAAATGTGGAACTAGTTAGAATTGAGATAGATGGGGAGCCATCAATTGGTGTTTCAAATGTGAAAGTTGGTACATCAGAACATAAGTACTTGTACAAGCAAGGACATGGAGAAAAGAAGATAGTGATGGTTGGAATGAAGGGATTGAATATCCCTGTAGGTAAGAGATTTTCTCTTATTTGGAAAATGGGGTCATAA 2787 0.3775 MVFLRPLLTLTLSSFLLTWFLCLAEETNYSSSKIGQGYRLISIEDTPDGALVGLLQVKQKNNIYGADIPLLCFYVKHETESRLRVHITDAKNKRWEVPYNLLPRQQPPALKPNIKRLRKNSLSVSEYSSSELVFSYTSDPFSFKVKRKSNGDTLFDTNSNNSDLFSPLVFKDQYLEISTKLPKNASLYGLGENTQPNGFKLHPNDPYTLYTTDISAVNLNFDLYGSHPVYMDLRNEGGKPYAHGVLLLNSNGMDVFYKGNYLTYKIIGGVFDFYFFAGPTPLNVVDQYTAFVGRPAPMPYWAFGFHQCRWGYHNLSVIEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTVNPINYPLPKLLSFLERIHNIGMKYIVINDPGIAVNTNYGVYQRGIANDVFIKYEGEPFMAMVWPGAVYFPDFLNPKTVSWWGDEIRRFHELVPIDGLWIDMNEVSNFCTGKCTIPKERFCPLQGEKLPNSTCCLDCTNITNTRWDDPPYKINASGKEAPIGYKTIATSAVHYNGVLEYDAHSLFGFSEAIATHKALHELQGKRPFVLSRSTYVGSGKYAAHWTGDNKGTWEDLKYSISTVLNFGIFGMPMVGADICGFYPAPTEELCNRWIEVGAFYPFSRDHSSVISPRQELYQWESVAESARNALGMRYKLLPYFYTLNYEAHISGAPIARPLFFSFPNYIQSYGLSTQFLLGTSLMISPVLEQGKTKVEALFPPGTWYSLFDLTQTIVSKDGSYVTLDAPLHEINVHLYQNTILPMQQGGMVSKDARMTPFSLIVTFPTGINEGEAKGNLFLDDDEMPDMKLGNGYSTYIDFHATIKEGTVTVWSEVQEGKFALDKGLVIDTINVLGLRYGNVELVRIEIDGEPSIGVSNVKVGTSEHKYLYKQGHGEKKIVMVGMKGLNIPVGKRFSLIWKMGS 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g06027 928 CDD GH31_MGAM_SI_GAA 293 675 - -
Trre1g06027 928 ProSitePatterns Glycosyl hydrolases family 31 active site. 446 453 IPR030458 -
Trre1g06027 928 PANTHER ALPHA-GLUCOSIDASE 38 874 - -
Trre1g06027 928 Pfam Glycosyl hydrolases family 31 274 767 IPR000322 GO:0004553|GO:0005975
Trre1g06027 928 Gene3D - 663 762 IPR013780 -
Trre1g06027 928 SUPERFAMILY Galactose mutarotase-like 34 281 IPR011013 GO:0003824|GO:0005975|GO:0030246
Trre1g06027 928 FunFam Alpha-glucosidase 1 663 763 - -
Trre1g06027 928 Pfam Galactose mutarotase-like 186 253 IPR025887 -
Trre1g06027 928 Pfam N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase 54 183 IPR031727 -
Trre1g06027 928 ProSitePatterns Glycosyl hydrolases family 31 signature 2. 602 632 IPR030459 -
Trre1g06027 928 SUPERFAMILY Glycosyl hydrolase domain 680 761 - -
Trre1g06027 928 SUPERFAMILY (Trans)glycosidases 284 678 IPR017853 -
Trre1g06027 928 Gene3D glycosyl hydrolase (family 31) 31 294 - -
Trre1g06027 928 Gene3D - 765 928 IPR013780 -
Trre1g06027 928 FunFam Maltase-glucoamylase, intestinal 295 662 - -
Trre1g06027 928 CDD GH31_N 175 293 - -
Trre1g06027 928 Gene3D Glycosidases 295 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g06027 Trre-Chr1 64574760 64578129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g06027 22 927 Glycoside Hydrolase AT1G68560 70.893 0.0 1378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g06027 K15925 - gmx:100816950 1567.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g06027 1 64574760 64578129 Trre1g06027 1 64574760 64578129 ECH