Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05926 ATGGAGTCCAATGGTCATAGAAGAGCAAAGAGATATGATTGTGTCATTAAAGAAAATGGTGATTCCCATTTGTCAAATGATGATGAGCATGATCCGTGGACTGCGTGGGCATACAAGCCTCGAACGATCACACTATTACTTATTGGTGCTGGCTTTCTTATTTGGGCAAGTGGAGCACTTGATCCTGAAAGAGATGCATCAGGCGATGTTGTTACTTCGGTTAAAAGGGGTGTATGGGCAATGATTGCTGTTTTTCTCACTTATTGCTTGCTGCAAGCTCCTTCTACGGTTCTCATTAGGCCGCATCCTGCAATTTGGCGCTTGGTACATGGGATAGCTGTTGTATACCTTGTTGCTCTCACCTTTTTGCTTTTTCAGAAACGGGATGATGCTCGACAGTTCATGAAGTATCTTCATCCTGATCTCGGCGTTGAACTTCCTGAAAGATCTTATGGTGCTGATTGTCGTATATATCTACCTGAAAACCCTGCAAGCAGGTTTAAGAATGTTTATGAAACACTTTTTGATGAGTTTGTTGTAGCACACATTATTGGGTGGTGGGGGAAGGCAATATTGATTCGTAATCAGCCCCTTCTTTGGGTGCTATCAATTGGTTTTGAGTTCATGGAGCTCACTTTCCGTCACATGTTACCGAATTTCAATGAGTGCTGGTGGGACAGTATTATTTTGGACATATTGATCTGCAATTGGTTTGGAATTTGGGCAGGAATGCATACTGTCCGGTATTTTGATGGGAAAACGTACAAGTGGGTTGGTCTTAGCCGCCAGCCTAATATTATAGGAAAAGTGAAAAGAACGTTAGGTCAATTCACGCCAGCTCAGTGGGACAAAGATGAGTGGCATCCGTTGCAGGGTCCATGGCGATTTATTCAAGTCCTAAGTCTTTGCACTGTATTTTTGACTGTAGAGCTGAACACATTCTTTTTGAAGTTTTGTCTATGGATACCTCCGCGAAATTCAGTTGTTATATATAGGTTAATTTTGTGGTGGTTACTTGCAATTCCAACAATTCGCGAGTACAACACATACCTTCAAGACAGTCTTTATGAATATTTTTTCAGCAAGCCAGTGAAAAAGGTTGGAGCTTATTGTTGGCTCTCCCTTGCTATTTGTATCGTCGAACTTCTAATTTGCATCAAATTTGGACACGGCTTATATCCGAAGTCGATGCCTTTATGGCTGGTAATTTTATGGTCATCTGTTGGAGTTGGAATTATTACATTTTTGGTTCTATGGTCTTGGCAACTCCATAGGAGTCTAGAGAGAAAGAGGAGATAA 1299 0.4142 MESNGHRRAKRYDCVIKENGDSHLSNDDEHDPWTAWAYKPRTITLLLIGAGFLIWASGALDPERDASGDVVTSVKRGVWAMIAVFLTYCLLQAPSTVLIRPHPAIWRLVHGIAVVYLVALTFLLFQKRDDARQFMKYLHPDLGVELPERSYGADCRIYLPENPASRFKNVYETLFDEFVVAHIIGWWGKAILIRNQPLLWVLSIGFEFMELTFRHMLPNFNECWWDSIILDILICNWFGIWAGMHTVRYFDGKTYKWVGLSRQPNIIGKVKRTLGQFTPAQWDKDEWHPLQGPWRFIQVLSLCTVFLTVELNTFFLKFCLWIPPRNSVVIYRLILWWLLAIPTIREYNTYLQDSLYEYFFSKPVKKVGAYCWLSLAICIVELLICIKFGHGLYPKSMPLWLVILWSSVGVGIITFLVLWSWQLHRSLERKRR 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05926 432 Pfam Phosphatidyl serine synthase 101 388 IPR004277 GO:0006659|GO:0106245
Trre1g05926 432 PANTHER PHOSPHATIDYLINOSITOL SYNTHASE 29 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05926 Trre-Chr1 63633384 63636498 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05926 1 432 Acyl Lipid Metabolism Gene Families AT1G15110 77.083 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05926 K08730 - gmx:100787048 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05926 1 63633384 63636498 Trre1g05926 1 63633384 63636498 ECH