Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05899 ATGTCCATCTTACGCCGCTTCAATCTAAACTTCACCAATCACCGTCTCCGTCGCCGATTCGCCACCGTTTCCGCTGCCGTACGTCAATACACAACCGTTTGGACTCCACTTCCTCTCTCCGAAATCGAACCAGCCGCTAAATCGCTCTTCCATATCGCCATCGACGTTTCCGACGCGCCGGACCTTGCTACATCACATACACGCGCCGGACAGTATCTTCAACTTAAAGTCGCTGACTCACCTAAACCGTCGTTTCTTGCAATCGCGTCGCCGCCGAAGCTTGCAATTAAGCGTGGTGTGTTTGAGTTTTTGGTGAAGAGTGTGGCGGGGTCCACCGCTGAAGCTTTGTGTGCGTTGAAGAAAGGTGATGTGGTTGAACTCAGTCAGGTTATGGGGAATGGATTCGATATTAGTCGGATTGAACCGCCGGAGAAATTTGGAACTGTTCTTGTCTTTGCAACTGGATCCGGAATTAGTCCAATTCGGTCACTTATTGAGTCAGGATTTGGTGCTGGCAAGAGGTCTGATGTGAGACTATATTATGGGGCCAGAAACCTTCAGAGAATGGCTTATCAGGATAGATTTAAAGACTGGGAATCTTCCGGTGTCAAGATTGTGCCTGTATTGTCTCAACCAGATGATAGTTGGACTGGAGAAAGTGGCTTTGTACAGGCTGCATTTACTAGAGCAAAGGAAATATCTAACCCATTGTCAACCGGTGCTGTACTCTGTGGGCAAAAGCAGATGACTGAGGAAGTTACATCTATTCTTGTTGCTGATGGAGTATCAGTTGAGAAGATACTAAAGAACTTCTGA 816 0.4743 MSILRRFNLNFTNHRLRRRFATVSAAVRQYTTVWTPLPLSEIEPAAKSLFHIAIDVSDAPDLATSHTRAGQYLQLKVADSPKPSFLAIASPPKLAIKRGVFEFLVKSVAGSTAEALCALKKGDVVELSQVMGNGFDISRIEPPEKFGTVLVFATGSGISPIRSLIESGFGAGKRSDVRLYYGARNLQRMAYQDRFKDWESSGVKIVPVLSQPDDSWTGESGFVQAAFTRAKEISNPLSTGAVLCGQKQMTEEVTSILVADGVSVEKILKNF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05899 271 Pfam Oxidoreductase NAD-binding domain 153 253 IPR001433 GO:0016491
Trre1g05899 271 PRINTS Phenol hydroxylase reductase family signature 150 169 - -
Trre1g05899 271 PRINTS Phenol hydroxylase reductase family signature 67 79 - -
Trre1g05899 271 PRINTS Phenol hydroxylase reductase family signature 175 184 - -
Trre1g05899 271 CDD FNR_like 68 268 - -
Trre1g05899 271 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 32 137 IPR017927 GO:0016491
Trre1g05899 271 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 143 268 IPR039261 -
Trre1g05899 271 SUPERFAMILY Riboflavin synthase domain-like 30 135 IPR017938 -
Trre1g05899 271 PANTHER - 2 271 - -
Trre1g05899 271 Gene3D - 146 271 IPR039261 -
Trre1g05899 271 Gene3D Translation factors 25 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05899 Trre-Chr1 63484436 63488095 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05899 - - lang:109346377 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05899 1 63484436 63488095 Trre1g05899 1 63484436 63488095 ECH