Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05882 ATGGGAGATCATGAGTGCCCTGCTTGCAGGAATTATAAGCCTCACTACGAAAAGGTTGCAAGGTTATTTAACGGAGCTGATGCAGTGCATCCAGGAATCATATTATTGACAAGGGTAGATTGTGCACTGAAGATAAATACTAAGCTCTGTGATAAGTTTTCTGTTGGTCATTATCCTATGCTCTTTTGGGGCGCTCCTCCTAAGTTTGTAGGGGGTAGTTGGGAACCAAAACAAGTGAAAAGTGATATACATGTGATTGATGATGCACGGACCGCTGATCGGTTGCTCAATTGGATAAACAAGCAAACGTCCAGTTCATTTGGTCTCGATGATCAAAAGTTTCAAAATGAGCAAGTTTCATCTAATGTATCAGACCATGAACAGATTGCAAGAGCTATCTATGACGTTGAAGAGGCAACTTCTACAGCTTTTGACATCATTTTAGAGAACAAGATGATAAAACCAGAAACGCGTGCTCCGCTTATAAAGTTTCTTCAGCTTTTGACAGCTCATCATCCTTCTAGGAGATGCCGGAAGGGCGCCGGAGAATTACTTGTGAGCTTTGATGACTTGTACCCAACAGATTTTTGGTCATCTCAGAAGCAAGAAGATGATAAGAGTTCAGCTAGGAATTTTCAGATTTGTGGAAAAGAGGTGCCGCGCGGATACTGGATGTTTTGCCGTGGAAGTAAAAATGAAACCAGAGGCTTTAGCTGTGGCTTATGGGTTCTTCTACATTCTCTCTCTGTGAGGATTGAGGACGGAGAGAGTCAGTTTACATTTAATGCAATATGTGATTTTGTTCACAACTTCTTCGTTTGCGAGGAATGCCGACAACATTTTTACAAGATGTGTTCAAGTGTTTCCAGTCCTTTCAACAAAGCCCGCGACTTTGCTCTCTGGTTGTGGAGTACCCATAACAAGGTAAACGAAAGGTTGAGTAAAGAAGAAGCTTCTCTAGGTACCGGTGATCCCAAATTCCCAAAGACAATTTGGCCTCCAAAGCAGCTTTGCTCTTCCTGTTACCTTGGCCATGACCAGAAGAGCAACAAAATTGAATGGAACCAGGATGAAGTCTACAAGGCTCTGAGAAATTATTATGGCACAGCGCTTGTGTCACTGTACAAAGAAAAGGGTATTGTTGGAAATGAAGGAACCGAAGGAGCTGCACTTGAAGATTTAATAGTCGCATCGAATGCAATTGTGGTGCCTGTGGGAGCTGCCTTGGCAATTGCTGTCGCTAGCTGTGCCTTTGGAGCACTTGCTTGCTACTGGCGTTCACAGCAGAAGAGTCGGAAGCCAAGGAGAACATGGAATTAG 1320 0.4333 MGDHECPACRNYKPHYEKVARLFNGADAVHPGIILLTRVDCALKINTKLCDKFSVGHYPMLFWGAPPKFVGGSWEPKQVKSDIHVIDDARTADRLLNWINKQTSSSFGLDDQKFQNEQVSSNVSDHEQIARAIYDVEEATSTAFDIILENKMIKPETRAPLIKFLQLLTAHHPSRRCRKGAGELLVSFDDLYPTDFWSSQKQEDDKSSARNFQICGKEVPRGYWMFCRGSKNETRGFSCGLWVLLHSLSVRIEDGESQFTFNAICDFVHNFFVCEECRQHFYKMCSSVSSPFNKARDFALWLWSTHNKVNERLSKEEASLGTGDPKFPKTIWPPKQLCSSCYLGHDQKSNKIEWNQDEVYKALRNYYGTALVSLYKEKGIVGNEGTEGAALEDLIVASNAIVVPVGAALAIAVASCAFGALACYWRSQQKSRKPRRTWN 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05882 439 Gene3D Glutaredoxin 3 133 - -
Trre1g05882 439 FunFam Sulfhydryl oxidase 3 132 - -
Trre1g05882 439 FunFam Sulfhydryl oxidase 225 376 - -
Trre1g05882 439 SUPERFAMILY Thioredoxin-like 5 103 IPR036249 -
Trre1g05882 439 Gene3D ERV/ALR sulfhydryl oxidase domain 225 375 IPR036774 GO:0016972
Trre1g05882 439 ProSiteProfiles ERV/ALR sulfhydryl oxidase domain profile. 230 332 IPR017905 GO:0016972
Trre1g05882 439 PANTHER QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE 4 131 IPR039798 GO:0016971
Trre1g05882 439 Pfam Erv1 / Alr family 239 333 IPR017905 GO:0016972
Trre1g05882 439 SUPERFAMILY FAD-dependent thiol oxidase 231 335 IPR036774 GO:0016972
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05882 Trre-Chr1 63408566 63411821 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05882 K10758 - gmx:100529131 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05882 1 63408566 63411821 Trre1g05882 1 63408566 63411821 ECH