Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05877 ATGAAGACTATTTTCTTCAATGGGTTTTCGTTTTTCTTGTTCCTTTTTGTTTTTTTACTGTCTTTGAGCTCGATTTCAGCTTTATCTTCAACTGGGTCAATTAATCACCACAATAAGTTTTTCATAGAAGGAGGAGATGTGAATTTGGGTTCATTGCAAAATGAAGCCACACAAGTGGCTCCAGCACCAGGGCCTCAAGGTCAGAATACTCTTATTCTGGCTGCAAATAGGACCAATAGACCTGATGTTCTTCGAGGATTTCATCGTTATCACGGTGGTTGGGATATTTCAGATCGACATTATTGGGCTTCAGTTGGATTCACCGGTGCCACAGGTTTTATTCTTGCTGTCTTATGGTTCATCTCATTTGGCTTGGCACTTGTGATTCATCTATGCTGTGGATGGGGGATTAACATCAAGGACAAAGGATCTAATCGCTCACAAAGGATTTGTCTTATATTGCTTTTGATATTCACCTTTGCCGCAGCGACTGGATGTATGCTCCTTTCTGTTGGGCAGAATAAGTTCCACGGCGAGGCCTTGGATACCCTCCATTTTTTTGTCAATCAATCAGACTATACGGTGCAGACTCTAAGAAATGTCACAGAGTATCTTTCCCTTGCAAAAACTATCAATGTTAACCAGATACCCCTTCCATCTAATGTCCTGGATGATATTGATAAGTTGAATGTGGATCTAAATACTGCAGCAGATACACTTTCTGAGAAGACAGATGAAAATTCTGTTAAGATTAGAAGAGTATTCAATTATGTGCGCCTAGCTTTGTTTGTTATGGCAGGAGTGATTTTTCTCTTGGCTCTAACTGGACTAGTCCTATCTCTCCTTGGATATCAACACGCAATCATCTTATTTGTTATCACTGGATGGTTACTTGTTGCAACCACATTCATTCTTTGCGGAGTATTCATGATCCTTAATAATACAATTTCTGATACCTGTATGGCTATGGGAGAATGGGTAGAAAATCCACATAGAGAATCTGCTCTTAGCGACTTCCTTCCATGTGTCGATCAGAGTACAACAAACAAAACACTTTTTCAAAGCAAACAAGTTGTCACCAATATTGCAAATATTGTCAACACGGCAATCTATAGTTTTGCAAATGTAAATGTAACACAAGGTAATCCAGGTTTTTACAATCAGTCTGGGCCTTTTATGCCGACGCTATGCTATCCCTTTGACAGTCAACTACAAGAACGGCAATGTTCAAGCCAAGAAGTTTCTTCTGCCAATGCTTCAATGGTCTGGAAGAATTATGTATGTGAGGTATCTGAATCGGGTATTTGCACTACAGTTGGTAGGGTGACTCCAGAAATTTACTCGCAATTCGCAGCCGCAGCTAAGGAAAGCTATGCATTAGAACATTATGCTCCACTCTTACTTAGCCTTCAGAATTGCAATTTTGTCAGGGATGCATTCACTGGAATAACTTCAAATTACTGTCCTCCATTAAAGCATTACCTCAAGATTATTAATGTAGGACTTGGCCTCATTTCAGTTGGCGTTCTACTCTGCCTTGTTCTGTGGATACTCTATGCAAACCGCCCCCAAAGGGGAGAAGTGTCTGTGAAGCTATCCTTAAAAGAAAAAATAAAGAGCAGATTTAACAAGAACCAGAATAGCACAAATTTAGTATTGCCAAATGCAGTTAGTGAAGTATAG 1683 0.3975 MKTIFFNGFSFFLFLFVFLLSLSSISALSSTGSINHHNKFFIEGGDVNLGSLQNEATQVAPAPGPQGQNTLILAANRTNRPDVLRGFHRYHGGWDISDRHYWASVGFTGATGFILAVLWFISFGLALVIHLCCGWGINIKDKGSNRSQRICLILLLIFTFAAATGCMLLSVGQNKFHGEALDTLHFFVNQSDYTVQTLRNVTEYLSLAKTINVNQIPLPSNVLDDIDKLNVDLNTAADTLSEKTDENSVKIRRVFNYVRLALFVMAGVIFLLALTGLVLSLLGYQHAIILFVITGWLLVATTFILCGVFMILNNTISDTCMAMGEWVENPHRESALSDFLPCVDQSTTNKTLFQSKQVVTNIANIVNTAIYSFANVNVTQGNPGFYNQSGPFMPTLCYPFDSQLQERQCSSQEVSSANASMVWKNYVCEVSESGICTTVGRVTPEIYSQFAAAAKESYALEHYAPLLLSLQNCNFVRDAFTGITSNYCPPLKHYLKIINVGLGLISVGVLLCLVLWILYANRPQRGEVSVKLSLKEKIKSRFNKNQNSTNLVLPNAVSEV 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05877 560 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 65 540 IPR040283 -
Trre1g05877 560 Coils Coil 226 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05877 Trre-Chr1 63369807 63373713 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05877 - - gmx:100791428 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05877 1 63369807 63373713 Trre1g05877 1 63369807 63373713 ECH