Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05858 ATGGGAGCTGAGAAGAAATGGCTTTTCACGTTATTTACTGCAGCGGTTTTATCCTTAATGATTTTGTTAATGTCTTCATTTTCTACCTTTAGTTCTCAAAAGCCTTTTCCTTCACTTGTTCAACATGGTTCTCATTATCCACCTGCTTTTGCATACTTTATCTCTGGTGGACATGGTGATAAAGACCGGATCTTTCGTTTGATGTTGGCAGTTTATCATCCGAGGAACCGTTACTTGCTTCATCTTGGTATGGATGCTAGGAATGAAGAGAGACAGGGTTTGGCTGATGCTGTTAGTTCTGTTCCGGCGATTCGTGCTTTCGGGAATGTTGATGTGGTTGGTAAGGCTGATTGGATCACTTATTTGGGTTCTTCAAATGTTGCTATTACATTGCGTGCTGCTGCTATTATGCTTAAATTGGATAGTGGATGGAATTGGTTTATCACTTTGAGTGCACGTGATTATCCTCTTATTACACAGGATGATCTATCCCATGTTTTCTCTTCCGTAAATAGAGACCTCAATTTCATTGATCACACCAGTGACCTTGGATGGAAAGAGAGTGACAGATTTCAGCCTATTGTAGTCGACCCTGGAACATATTTAGCAAGGAGAAGTCAAATTTTTCAAGCTACAGAGAAGAGGAAAACACCTGATGCATTCAAACTCTTCACCGGTTCGCCATGGGTCACCTTGAGCCGACCTTTTCTGGAGTTCTGCATTTTTGGTTGGGATAATTTACCAAGAACGCTACTGATGTATTTTACAAATGTTAAGTTATCTCAAGAAGGCTACTTTCACTCAGTCATTTGCAACGCACCAGAATTCAAGAACACAACAGTAAATGGTGACTTACGATACATGATATGGGACAATCCTCCGAAGATGGAACCACTCTTCCTTAACACGTCAGTTTATGACATGATGGCAGAAAGTGGAGCAGCTTTTGCAAGACAGTTCGAGGCCAATAACCGCGTGCTAGATATGATAGATGCAAAAATTCTCCAACGCAGTGGCAATCGAGCCGCACCTGGAGCATGGTGCACCGGACGGAGGAGTTGGTGGGTGGATCCGTGCTCACAGTGGGGTGATGTCAATATTCTGAAGCCAGGTCCTCAGGCTAAGAAGCTTGAGGCGACTATTTCTAGTCTTCTTGATGACTGGTCGGCACAGACGAATCAGTGCCAGTGA 1191 0.4324 MGAEKKWLFTLFTAAVLSLMILLMSSFSTFSSQKPFPSLVQHGSHYPPAFAYFISGGHGDKDRIFRLMLAVYHPRNRYLLHLGMDARNEERQGLADAVSSVPAIRAFGNVDVVGKADWITYLGSSNVAITLRAAAIMLKLDSGWNWFITLSARDYPLITQDDLSHVFSSVNRDLNFIDHTSDLGWKESDRFQPIVVDPGTYLARRSQIFQATEKRKTPDAFKLFTGSPWVTLSRPFLEFCIFGWDNLPRTLLMYFTNVKLSQEGYFHSVICNAPEFKNTTVNGDLRYMIWDNPPKMEPLFLNTSVYDMMAESGAAFARQFEANNRVLDMIDAKILQRSGNRAAPGAWCTGRRSWWVDPCSQWGDVNILKPGPQAKKLEATISSLLDDWSAQTNQCQ 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05858 396 PANTHER GLYCOSYLTRANSFERASE 4 395 IPR044610 GO:0015020
Trre1g05858 396 Pfam Core-2/I-Branching enzyme 50 297 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05858 Trre-Chr1 63258911 63262467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05858 1 396 Glycosyltransferase AT1G71070 69.192 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05858 - - gmx:100786633 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05858 1 63258911 63262467 Trre1g05858 1 63258911 63262467 ECH