Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05853 ATGACTAAAGAAGAAGACTTTAAGCTCCTTAAAATCCAGACTTGTGTTCTCAAAGTGAACATTCACTGTGATGGTTGTAAGCAGAAAGTGAAGAAACTACTTCAGAGAATTGAAGGTGTTTACCAAGTTCAAATAGATGCAGAACAACAGAAGGTAACAGTTTCAGGTAGTGTGGATGCTGCAACTTTGATCAAGAAGCTAGTAAGATCTGGAAAATATGCTGAATTATGGTCTCAGAAAACAAATAATAATAATCAGAATCAAAAGCAGAAGAATAACAACATTGTCAAAGATGACAAGAACAAAGGACAAAAACAAGTACTGGTCAAAGGACTTGAGGTCTTCAAGAACCAGCAGAAATTTCCTGCTTTTAGTTCCGAAGAGGACGGTGAATACTACGGAGGATATGGTGATGACGACGACGAAGAGGAGGATGATCCGGAGTCGATGTACATCAGGGAGGCAGCCAATCAAATTCAAATGATGAGGCAGCAAGCAGTTGATGCAAACAATGCGAAGAAAGCTATTGGAGCTAAGATGAACAATGCTGGCAATAATGTGAATGGAAACGGTGGCAAGAAAGGAAACTCGAATCAGAACATGGTAGGAATGAAAATGAAGGAAAGTGCTAATGGGGTCGATCAGAAAACAATTGCAGCTATGAAGTTGAACAATGGTCATTTAGTTGGTAATGAAAGCATCAATCTTGGAGAATCCAAAAGGGCTAGTGCTAGTGACATTGGTGCTATGATGAATTTAGCTGGTTTTAATGGTAACGGCGTCGGTAAAGCTACTATTCTAAGTGGAAATTCCAATGGTTTAGGTGGTTTTCCTGTTCAATCCAATAATACTAATATGATTCAAGGTTCATCTGCAGTAGCTATTCCAAATGGTGGTTTTGTTACTGGTCAATATCCAGCATCAATGATGATGAACATGAACATGAATGGTTTCAATAATCATCCAACTTCATTGATGAACATGAACATGCAACAGGCAAGACATGTTATGCAGCAGCAACAGCCTCAGATGATGTATCATAGGTCACCTTATGTTCCTCCTAACACTGGCTATTACTACAATTACAATAATAATAATAATAACTACATTCCTCCAAATGCAAATTACTCATCCTATGCAATGCCTAGTGAGGATCAAGATAACTCTGCAGCACATATGTTCAGTGATGACAATACAAGCAGCTGTTCAATAATGTAA 1218 0.3826 MTKEEDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQRIEGVYQVQIDAEQQKVTVSGSVDAATLIKKLVRSGKYAELWSQKTNNNNQNQKQKNNNIVKDDKNKGQKQVLVKGLEVFKNQQKFPAFSSEEDGEYYGGYGDDDDEEEDDPESMYIREAANQIQMMRQQAVDANNAKKAIGAKMNNAGNNVNGNGGKKGNSNQNMVGMKMKESANGVDQKTIAAMKLNNGHLVGNESINLGESKRASASDIGAMMNLAGFNGNGVGKATILSGNSNGLGGFPVQSNNTNMIQGSSAVAIPNGGFVTGQYPASMMMNMNMNGFNNHPTSLMNMNMQQARHVMQQQQPQMMYHRSPYVPPNTGYYYNYNNNNNNYIPPNANYSSYAMPSEDQDNSAAHMFSDDNTSSCSIM 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05853 405 MobiDBLite consensus disorder prediction 132 147 - -
Trre1g05853 405 FunFam Copper transport protein ATOX1 11 80 - -
Trre1g05853 405 MobiDBLite consensus disorder prediction 126 147 - -
Trre1g05853 405 CDD HMA 16 75 IPR006121 GO:0046872
Trre1g05853 405 MobiDBLite consensus disorder prediction 80 101 - -
Trre1g05853 405 ProSiteProfiles Heavy-metal-associated domain profile. 12 75 IPR006121 GO:0046872
Trre1g05853 405 MobiDBLite consensus disorder prediction 380 405 - -
Trre1g05853 405 Coils Coil 152 172 - -
Trre1g05853 405 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 6 405 - -
Trre1g05853 405 SUPERFAMILY HMA, heavy metal-associated domain 12 78 IPR036163 GO:0046872
Trre1g05853 405 Gene3D - 12 84 - -
Trre1g05853 405 Pfam Heavy-metal-associated domain 17 69 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05853 Trre-Chr1 63228814 63230737 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05853 - - gmx:100784535 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05853 1 63228814 63230737 Trre1g05853 1 63228814 63230737 ECH