Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05851 ATGGAAAAAACACTGCTCTTGAAATTGTTCACTCTTTTAGCACTTTTACTATGCTGTTCTGTGACATCATCATCATCATCAGCTAAAGACAATCTTATAAATGTGTCTAAATTGAAGATGTTTGTTGATGAACTTCCCAAAATACCCAGAATTCTTGGCTACAAGGTAGTTAATGGCGTCCCCAAATCAAAGTCTCTCAAGATTGGCATGTTCAAGAAGAAATGGAAATTCCACAGGGATCTACCACCAACAACAGTTTATGCTTACGGAATAAACAAGCACACAGCAACAGTCCCTGGTCCAACAATAGAAGCGCTCTATGCAATCAGCACCCACGTGACGTGGCAAAATCACCTCCCTCCAAATCACATCCTACCATGGGATCCAACAATCCCCACATCATTAACAAATTCAACAAACGGCATCCCCACCGTAGTCCATCTCCACGGTGGAATCCACGAACCATCAAGTGATGGAAACCCAAACTCATGGTTCACTGCTAGATACAAAATCAAGGGTCCCACTTGGACCAAAAAAACCTATCACTATCCCAATAATCAACACCCTGGAAATCTTTGGTACCATGACCATGCTATGGGGTTGACTAGAGTCAACCTTCTTGCTGGCTTAATCGGTTCCTACATCATTCGTAACCCTAAAATCGAATCTCCATTAGGTTTACCTCACGGTAACGAATTCGATCTACCGTTGATGCTTTTCGATCGTAGCTTTAAAACGGACGGTTCGATTTTCATGAATTCCACCGGTAACAACCCTTCGATTCATCCACAGTGGCAACCGGAATATTTCGGTGACGCAATCATTGTTAATGGAAAAGCATGGCCTCGATTAACTGTACGACGTCGTAAGTATAGATTTCGTATAATCAACGCTAGTAACGCTAGATTTTTTAGACTGTTTTTTACAAACGGTTTAAGATTTGTACACGTGGCATCTGATTCAGCTTATATTGGTAAACCAGTTGTGAGTAATGAAACTTTTGTGGGGCCATCTGAGATCACAGATGTTATAGTTGATTTTTCTCAATCGAAGAGTAAAGTAGCTATTTTACACAACAATGCAGCTTATCCTTACCCATCCGGTGATCCGGTTGATGAGTTTAGTGGTAAGGTTATGAAGTTTGTTATTTTACCGGATAATGAAGTTGACACGTCACGGATACCGGAAAAGCTTGTGGAGTATCCGGTTGTTGATTTATCTAGTGTGACGCGCACACGGTATATTGCTATGTATGAGTATACTAGTGATATTGATGAACCGACTCATTTGTATTTGAATGGGAAACCTTATGAAGCACCGGTTACTGAAACTCCGAAAGTGGGGTCCACTGAGGTTTGGTATGTGATTAACTTAACGGATGATAATCATCCGCTTCATATTCATTTGGGTTTGTTTAAGGTTTTGGATCAAACAGAGTTGGTGAAATCTGATGAGTTTAAGGATTGTATGAAGAAAATCAATGATGCTGTTAAGTGCCACGTGGAGGAGCATGCACGTGGGAAGAAAGTATTGGTGCCTGATTATGAGAAAGGTTGGAAAAATGTGTTTAAGATGAGTCCTGGGTTTGTTACAAAGATTGTTGTGAGGTTTGGTTACATACACACAAATACATCGTATGGGTTTGATGCAACTGCTGAATCTGGTTACGTGTATCATTGTCATATATTGGACCATGAAGACAATGCTATGATGAGACCCTTGCAGATCATCAAGTGA 1737 0.4059 MEKTLLLKLFTLLALLLCCSVTSSSSSAKDNLINVSKLKMFVDELPKIPRILGYKVVNGVPKSKSLKIGMFKKKWKFHRDLPPTTVYAYGINKHTATVPGPTIEALYAISTHVTWQNHLPPNHILPWDPTIPTSLTNSTNGIPTVVHLHGGIHEPSSDGNPNSWFTARYKIKGPTWTKKTYHYPNNQHPGNLWYHDHAMGLTRVNLLAGLIGSYIIRNPKIESPLGLPHGNEFDLPLMLFDRSFKTDGSIFMNSTGNNPSIHPQWQPEYFGDAIIVNGKAWPRLTVRRRKYRFRIINASNARFFRLFFTNGLRFVHVASDSAYIGKPVVSNETFVGPSEITDVIVDFSQSKSKVAILHNNAAYPYPSGDPVDEFSGKVMKFVILPDNEVDTSRIPEKLVEYPVVDLSSVTRTRYIAMYEYTSDIDEPTHLYLNGKPYEAPVTETPKVGSTEVWYVINLTDDNHPLHIHLGLFKVLDQTELVKSDEFKDCMKKINDAVKCHVEEHARGKKVLVPDYEKGWKNVFKMSPGFVTKIVVRFGYIHTNTSYGFDATAESGYVYHCHILDHEDNAMMRPLQIIK 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05851 578 Pfam Multicopper oxidase 421 575 IPR011706 GO:0005507|GO:0016491
Trre1g05851 578 Gene3D - 36 216 IPR008972 -
Trre1g05851 578 SUPERFAMILY Cupredoxins 231 358 IPR008972 -
Trre1g05851 578 SUPERFAMILY Cupredoxins 402 576 IPR008972 -
Trre1g05851 578 CDD CuRO_3_CotA_like 410 576 - -
Trre1g05851 578 SUPERFAMILY Cupredoxins 62 221 IPR008972 -
Trre1g05851 578 FunFam Spore coat protein A 37 217 - -
Trre1g05851 578 Gene3D - 220 399 IPR008972 -
Trre1g05851 578 FunFam Spore coat protein A 400 578 - -
Trre1g05851 578 CDD CuRO_1_BOD_CotA_like 68 219 - -
Trre1g05851 578 ProSitePatterns Multicopper oxidases signature 2. 559 570 IPR002355 GO:0005507
Trre1g05851 578 Pfam Multicopper oxidase 272 352 IPR001117 -
Trre1g05851 578 FunFam Multi-copper oxidase type I family protein 220 399 - -
Trre1g05851 578 Pfam Multicopper oxidase 133 220 IPR011707 GO:0005507
Trre1g05851 578 Gene3D - 400 578 IPR008972 -
Trre1g05851 578 CDD CuRO_2_CotA_like 233 383 - -
Trre1g05851 578 PANTHER CUPREDOXIN SUPERFAMILY PROTEIN 10 577 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05851 Trre-Chr1 63208900 63212411 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05851 - - gmx:100799744 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05851 1 63208900 63212411 Trre1g05851 1 63208900 63212411 ECH