Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05846 ATGAATTCTCTATCCATATTTGCGTTTTTCTGTGCGATTTCCGTCGCGGCAGCTTCCAAAGCCTATCCATCCGTCCCCGGCCTCGATTCCGGCGATTGCTCTCTCACCGGCGAAGAAACTACTCTTGTTCCTCCACGGCGAGAAGTCTACGATGAGGGAAAAATATACGATATTTCCCACAGATACGTTCCTACCTTACCGGTGTGGGAATCTGAAGAAGGATTAGGTCACTTCTTATGGCTTGCTTCTAGCATGAAGAATGGATCACGCGCTAATGGCTCCGCTATGCAGCTTGGTGCTCACACTGGTACTCACGTTGACGCGCCTGGTCACTTCTATGATAATTACTACGACGCTGGATTCGATGTTGATTCTCTTGATTTACAACTCCTCAATGGTCTTACCCTTTTGGTTGATGTTCCACGGGCCAGCAATATTACTGCTGAAGTTATGAAGTCCTTGAACATTCCTAAAGGTGTAAAGCGTGTGCTCTTCAGAACATTAAATACTGACAGGCGACTTATGTTTAAGAAGGAATTTGATACAAGCTATGTTGGGTTTATGGAGGATGGTGCAAAATGGCTGGTGGAGAACACTGACATCAAACTTGTAGGAGTTGATTACTTATCTGCTGCAGCTTACGTTCACTCGGTTGAGTCTCATCTTGTTTTTCTGAAAAGCAGGGAAATCATTCTTGTGGAAGGCCTTAAACTAGATGGTGTCCCAACAGGATTATATTCACTCAACTGCTTGCCTCTCAGGTTGGTTCATTCTGAGGCATCACCAATACGATGCATTCTGACAGGATGA 810 0.4506 MNSLSIFAFFCAISVAAASKAYPSVPGLDSGDCSLTGEETTLVPPRREVYDEGKIYDISHRYVPTLPVWESEEGLGHFLWLASSMKNGSRANGSAMQLGAHTGTHVDAPGHFYDNYYDAGFDVDSLDLQLLNGLTLLVDVPRASNITAEVMKSLNIPKGVKRVLFRTLNTDRRLMFKKEFDTSYVGFMEDGAKWLVENTDIKLVGVDYLSAAAYVHSVESHLVFLKSREIILVEGLKLDGVPTGLYSLNCLPLRLVHSEASPIRCILTG 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05846 269 FunFam Kynurenine formamidase 50 268 - -
Trre1g05846 269 SUPERFAMILY Putative cyclase 53 267 IPR037175 GO:0004061|GO:0019441
Trre1g05846 269 Gene3D Putative cyclase 49 268 IPR037175 GO:0004061|GO:0019441
Trre1g05846 269 PANTHER CYCLASE-LIKE PROTEIN 2 9 268 IPR007325 GO:0004061|GO:0019441
Trre1g05846 269 Pfam Putative cyclase 56 211 IPR007325 GO:0004061|GO:0019441
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05846 Trre-Chr1 63127293 63131318 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05846 - - gmx:100800277 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05846 1 63127293 63131318 Trre1g05846 1 63127293 63131318 ECH