Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05845 ATGGGCAAGCCAAATACAAGGTCAGATTCATCAGATTCAAAGTCGGACCGCAAGTTCGAAAAAAAGCTACAGTTTTATACCAAGGTGAAAAATGCTGTTGCTTCCTTGACTGCACAAAAGTCTATTTCTAAGAACAAGAGCAAACATCAAAGGCGGCAGAAAAAATTGAAAGCATATAACCTCTCTTCATTCTTAGAGACCCTTCCGGGGTTGAAGGAACCACAGAAACCAAGCAATGAGGATAACTTCAAGCTTAATTGTAAAAATCGACAGACCTTAGTATTGAAGGAAGGACAACGATTGTCTGAGTTTTTTAAGGATCATTCCTCCCAAGTGGATCCCTTGGCTGCTATTTATCAACACTTACGGAGCACACAACCAGAACCAGTAGTAGAGGAACAACTGCCCAAGAAAAGACCGAACATAAATGGGTCGAAGAAGAGGAAGAATAAATCAAAGGCTGGGTCTGGAATTCGGTCTATGGAAATATAA 492 0.4065 MGKPNTRSDSSDSKSDRKFEKKLQFYTKVKNAVASLTAQKSISKNKSKHQRRQKKLKAYNLSSFLETLPGLKEPQKPSNEDNFKLNCKNRQTLVLKEGQRLSEFFKDHSSQVDPLAAIYQHLRSTQPEPVVEEQLPKKRPNINGSKKRKNKSKAGSGIRSMEI 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05845 163 MobiDBLite consensus disorder prediction 125 163 - -
Trre1g05845 163 PANTHER PROTEIN FAM207A 9 149 - -
Trre1g05845 163 Pfam Ribosome biogenesis protein SLX9 11 125 IPR028160 GO:0000462|GO:0005730|GO:0030686|GO:0030688
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05845 Trre-Chr1 63119507 63121287 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05845 - - psat:127097920 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05845 1 63119507 63121287 Trre1g05845 1 63119507 63121287 ECH