Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05821 ATGTCTAATTTCTCAGAGTTCAAACCTTTGAACGAGAACACGCTGATCGAATACATAAAATCAATCCCTTCCCTTTCATCAAAACTCGGCAACAACTTCTCCGACATATCCGTTAAAGAAGTCGGAGATGGCAACCTTAATTTCGTCTTCATCGTTTCCAACTCAAATGGTTCTTTTGTCCTCAAACAGGCTTTGCCATATGTTCGTTGCATAGGAGAATCATGGCCGATGACAAAAGAAAGAGCTTATTTTGAGTCGTTGGCTTTGATAGAAGAGGGTAAATTGTGTCCTCAACATGTTCCAGAAGTTTATCATTTTGATCGTACAATGTCTTTGATTGGTATGCGTTATTTGGAACCACCGCATATAATTCTCAGAAAAGGATTGATTGCTGGTGTTGAGTATCCTTTCTTAGCTGAACATATGTCTGATTTCATGGCAAAGACACTCTTTTTTACTTCTCTGCTTTTTCGTTCTACTACCGAGCATAAACGGGACGTTGCTGAATTTTGCGGGAATGTGGAGCTATGCAGACTCACTGAGCAGGTTGTATTCTCTGACCCTTATAAAGTTTCTGAGTATAATCGCTGGAGTTCTCCTTATCTTGACCAAGATGCCGAAGCTGTTCGGGAAGACAATCTACTAAAGCTTGAAGTTGCTGAGCTGAAATCAAAGTTCTGTGAGAGGGCTCAGGCACTAATACATGGAGATCTACACACTGGTTCTGTGATGGTTACTCATGAATCAACACAAGTTATTGATCCGGAATTTGCATTTTATGGACCAATCGGTTTTGATATTGGAGCATTCCTGGGAAACTTGATTTTGGCTTACTATTCTCAGGATGGACATGCTGATCAAGCAAACGATCGAAAAGGATATAAGGAATGGATTCTTAAGACAATTGAAGACACTTGGAATCTTTTCCACCATAAATTCACTGCACTTTGGGATGAACATAAAAATGGTGCTGGTGAGGCATATCTTCCAGCAATCTATAACAATCCTGAAGTTCAACTACTTGTCCAGAAGAAATACATGACAGATGTGTTTCATGATAGTCTCGGATTTGGTGCTGCCAAAATGATAAGGAGAATTGTTGGCGTGGCACATGTTGAGGATCTTGAATCTATTGCTGACGCTGGTAAACGGGCAACCTGTGAACGTCGTGCACTTAATTTAGCTAAGATGCTTCTCAAAGAAAGAAGAAAATTTGAGAGCATTTCTGAAATTGTCTCGGCAATTCAGCAATTCTAG 1257 0.401 MSNFSEFKPLNENTLIEYIKSIPSLSSKLGNNFSDISVKEVGDGNLNFVFIVSNSNGSFVLKQALPYVRCIGESWPMTKERAYFESLALIEEGKLCPQHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGVEYPFLAEHMSDFMAKTLFFTSLLFRSTTEHKRDVAEFCGNVELCRLTEQVVFSDPYKVSEYNRWSSPYLDQDAEAVREDNLLKLEVAELKSKFCERAQALIHGDLHTGSVMVTHESTQVIDPEFAFYGPIGFDIGAFLGNLILAYYSQDGHADQANDRKGYKEWILKTIEDTWNLFHHKFTALWDEHKNGAGEAYLPAIYNNPEVQLLVQKKYMTDVFHDSLGFGAAKMIRRIVGVAHVEDLESIADAGKRATCERRALNLAKMLLKERRKFESISEIVSAIQQF 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05821 418 PANTHER METHYLTHIORIBOSE KINASE 5 417 - -
Trre1g05821 418 Pfam Phosphotransferase enzyme family 38 277 IPR002575 -
Trre1g05821 418 NCBIfam S-methyl-5-thioribose kinase 7 415 IPR009212 GO:0009086|GO:0046522
Trre1g05821 418 Gene3D - 122 418 - -
Trre1g05821 418 PIRSF MTRK 2 418 IPR009212 GO:0009086|GO:0046522
Trre1g05821 418 Gene3D Phosphorylase Kinase; domain 1 2 121 - -
Trre1g05821 418 SUPERFAMILY Protein kinase-like (PK-like) 6 417 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05821 Trre-Chr1 62944292 62948076 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05821 K00899 - gmx:100807564 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05821 1 62944292 62948076 Trre1g05821 1 62944292 62948076 ECH