Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05816 ATGCATGCTCTCAGTTTTTTCTTAGTACTCCTTGCTACTACAATGCATGGAATTCAAGCAGTTGATTATAGTGTCACCAACAATGCCCTCTCCACTCCAGGTGGAGTACGTTTTCGTGATCAAATAGGAGCACAATACGCGACACAAACACTAGATGCCGCGACACAATTCATATGGAAAGTGTTCCAACAGAACACCCCTGCCGATAGAAAAACTGTGCAGAAGGTGAGTCTTTTTGTAGACGACATGGATGGTGTTGCATATACAAGCAACAATGAAATTCACCTAAGTGCAAGATATGTTAATAGCTATAGTGGTGATTTGAAAAATGAAATTACAGGAGTTTTGTATCATGAAATGACACATGTTTGGCAGTGGAATGGTAATGGTCAAGCTAATGGTGGATTAATTGAAGGTATAGCAGATTATGTTAGATTGAAAGCAAATTATGCACCTAGTCATTGGGTGAAACCAGGACAAGGAAATAAATGGGATCAAGGTTATGATGTTACAGCTCGGTTTTTGGATTATTGTAATGGTTTGAGAAATGGGTTTGTAGCAGAATTGAATAAGTTGATGAGGAATGGTTATAGTGATCAATTCTTTGTTCAACTTTTGGGGAAAACGGTTGATCAACTGTGGAAAGATTATAAGGCAAAGTATGGCAATATTGCCTAA 678 0.382 MHALSFFLVLLATTMHGIQAVDYSVTNNALSTPGGVRFRDQIGAQYATQTLDAATQFIWKVFQQNTPADRKTVQKVSLFVDDMDGVAYTSNNEIHLSARYVNSYSGDLKNEITGVLYHEMTHVWQWNGNGQANGGLIEGIADYVRLKANYAPSHWVKPGQGNKWDQGYDVTARFLDYCNGLRNGFVAELNKLMRNGYSDQFFVQLLGKTVDQLWKDYKAKYGNIA 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05816 225 PANTHER - 5 221 IPR007541 -
Trre1g05816 225 Pfam Peptidase of plants and bacteria 20 217 IPR007541 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05816 Trre-Chr1 62934772 62935566 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05816 - - gmx:100499938 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05816 1 62934772 62935566 Trre1g05816 1 62934772 62935566 ECH