Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05810 ATGGAAGATGGAAAATGGGTTCTGGTGCGCCGCTCTTCACAGAAGGACTTGTGGAGACCAAGTTTACCAAATGCTGATGATGAACCTTCAAGGCCCTTGAAGGTTACCTTTTCTGAGCCTGCAGAGTACTGGACTGATGCCATCCCCATTGGAAATGGCCGTCTTGGGGCTATGATTTGGGGTGGTGTACAATCAGAAGTTCTACAGCTCAATGAGGACACATTATGGACTGGGGTACCTGCCAACTACACCGACAAAAATGCTCCTGAAGCACTGGCTAAAGTCCGAAAACTTGTTGATGACAGAAAATATTCAGAAGCTTCAATAGAAGCTACCAAATTGACAGGAGGTTCTACTGAGGTATACCAACCTCTTGGTGATATTAAATTAGAATTTGATGATTCTCATCTGAAATATTCGGAAGAGTCTTATCACAAGGAGCTTGATTTGGATATTGCAACAGCAAAAATAAAATACAATGTCAGTGCTGTAGAATTTACCAGAGAGCATTTTGCTTCTAATCCGGACCAAGTGCTAGTGACAAAGTTTTCCACAAGCAAATCGGGGACATTATCATTTACAGTATCTTTGGATAGCCAATTAGATCACAATTTACGGGTAAGCGGCCAAAATCAGATAATAATGGAAGGAAGCTGCCGTGGCAACCCAAAAGGAATTCAGTTTTCTGCAGTTCTTGATATGCAGATTAGTACTGAAAAAGGGGTTATACATGTTTTGGATCATAACAAGCTTAGAGTTGAAGGTTCAGATTGGGCTATTTTGCTTCTGACAGCTTCCTCATCTTTTGATGGTCCATTTACTAAGCCTGAAGACTCTAAAAAAGATCCTACTTCCGAATCCTTGAGTAAAATGAAGTCTGCCAAAAGTTTTTCATATGATGATATTTACGCACGTCACTTGGATGACTATCAGAATCTATTTCATCGGGTCTCATTGCAACTCTCTAAAAGTTCCAAGACTGTTTTAGGAAAACCTATTGTGGACGAAAGGAAATTGGTTTCCCGTCAAACTAACATCTCTCAAATTGGAGGTGATAATGTTGTTCCAACTTCATCAAGAATCAAATCATTTCAAAATGATGAAGATCCTTCCTTTGTGGAGCTTTTGTTTCAATTTGGTCGATATCTCTTAATTTCTTGTTCACGTCTTGGAACTCAAGTGGCAAACCTGCAGGGTATATGGAACAAAGATGTTACACCTGCATGGAATGGGGCACCGACCTTGAACATAAATCAAGAAATGAACTATTGGCAATCCCTACCATGCAACCTACATGAGTGTCAGGAGCCACTATTTGATTACATTTCCTCTTTGTCAATGGTAGTAAAACTGCAAAGCATGCAGGTGAATTATGAAGCAAATGGTTGGGTTACACATCATGTTTCTGACATATGGGCTAAAACATCCCCATATAAAGAAGATCCTGTTTGGGCTATATGGCCAATGGGTGGAGCTTGGCTTTGTACTCATCTATGGGAGCATTACACGTATACAATGGACAGGGAATTTCTAAAAAATAAAGCATACCCTTTATTGGAAGGATGTACATTATTTTTATTGGATTGGTTGATCGAAGGCTCTGGTGGATTTTTGGAAACTAACCCATCAACTTCACCAGAGCACAAGTTCATTGCACCAGATCAAAAGCAAGCTAGTGTGAGCTACTCATCAACCATGGACATATCAATCATAAAAGAAGTTTTCTCTATAATCATTTCTGCTGCCGAGGTTTTGGGAAGACAAAATGATGCTATTATTAAAAGAGTGAGTGAATCTCAGTCTAAGCTTCCTCCTATAAAAGTTGCTAGGGATGGGTCCATTATGGAATGGGCTGAAGATTTTCAGGACCCAGAAACACATCATCGACATTGTTCGCATCTGTTTGGCTTGTTTCCAGGGCACATAATAAGTCTTGAGAAAAATCCAGATCTCTGTAAAGCTGTGGGTTATAGTCTAATGAAAAGAGGAGAAGAAGGTCCCGGGTGGTCAACAACTTGGAAAGCTGCATTATGGGCTCGTCTTCACAACAGCGAGCATGCATATCGCATGATAAAACATTTGATTATCCCTGCGGAGCCTAATAACAATGAAACAAAATTTGACGGAGGACTTTACAGAAACCTGTTCACAGCGCATCCTCCTTTCCAAATTGATGCAAACTTTGGTTTTTCAGCAGCAATTGCAGAGATTCTTGTTCAAAGCACAACGAAGGACCTCTACTTACTTCCTGCGTTGCCTCGGGATAAATGGGCAAATGGTTGTGTGAAAGGATTAAAAGCGCGTGGCGGGGTGACGGTCAACATCTGCTGGAAAGAAGGTGATCTGCATGAGGTTGGCCTTTGGTCACAAAATCAGAATTCCAGCATTAGACTACATTATAATGGGAACAAAGTTGTGGCAAACTTATCACCAGGAAAAGTTTACTCATATAATAATCAGTTGAAGTGTGTTAAGACATACTCCTTTAGCGAAGTCAATCCCTAA 2505 0.4052 MEDGKWVLVRRSSQKDLWRPSLPNADDEPSRPLKVTFSEPAEYWTDAIPIGNGRLGAMIWGGVQSEVLQLNEDTLWTGVPANYTDKNAPEALAKVRKLVDDRKYSEASIEATKLTGGSTEVYQPLGDIKLEFDDSHLKYSEESYHKELDLDIATAKIKYNVSAVEFTREHFASNPDQVLVTKFSTSKSGTLSFTVSLDSQLDHNLRVSGQNQIIMEGSCRGNPKGIQFSAVLDMQISTEKGVIHVLDHNKLRVEGSDWAILLLTASSSFDGPFTKPEDSKKDPTSESLSKMKSAKSFSYDDIYARHLDDYQNLFHRVSLQLSKSSKTVLGKPIVDERKLVSRQTNISQIGGDNVVPTSSRIKSFQNDEDPSFVELLFQFGRYLLISCSRLGTQVANLQGIWNKDVTPAWNGAPTLNINQEMNYWQSLPCNLHECQEPLFDYISSLSMVVKLQSMQVNYEANGWVTHHVSDIWAKTSPYKEDPVWAIWPMGGAWLCTHLWEHYTYTMDREFLKNKAYPLLEGCTLFLLDWLIEGSGGFLETNPSTSPEHKFIAPDQKQASVSYSSTMDISIIKEVFSIIISAAEVLGRQNDAIIKRVSESQSKLPPIKVARDGSIMEWAEDFQDPETHHRHCSHLFGLFPGHIISLEKNPDLCKAVGYSLMKRGEEGPGWSTTWKAALWARLHNSEHAYRMIKHLIIPAEPNNNETKFDGGLYRNLFTAHPPFQIDANFGFSAAIAEILVQSTTKDLYLLPALPRDKWANGCVKGLKARGGVTVNICWKEGDLHEVGLWSQNQNSSIRLHYNGNKVVANLSPGKVYSYNNQLKCVKTYSFSEVNP 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05810 834 Pfam Glycosyl hydrolase family 65, N-terminal domain 36 271 IPR027414 -
Trre1g05810 834 PANTHER ALPHA-L-FUCOSIDASE 2 25 827 - -
Trre1g05810 834 SUPERFAMILY Six-hairpin glycosidases 281 788 IPR008928 GO:0005975
Trre1g05810 834 PIRSF UCP007663 7 831 IPR016518 GO:0004560
Trre1g05810 834 Gene3D - 260 738 IPR012341 GO:0005975
Trre1g05810 834 FunFam Alpha-L-fucosidase 2 256 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05810 Trre-Chr1 62904003 62912353 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05810 K15923 - gmx:100810387 1345.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05810 1 62904003 62912353 Trre1g05810 1 62904003 62912353 ECH