Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05797 ATGGACAGAGGAAAGATCGAAGAAGTGATCGAGAAGCAAGTACTCACGGTGGCGCAAGCCGTCGAGGACAAGATCGATGAAGAGATCGCCGCCCTTGAACGCCTCGACGATGATGATCTTGAAGCCCTCAGGGAACGCAGGTTACAACAAATGAAGAAAATGGCGGAGAAGCGTAGCCGTTGGATCTCCCTCGGACACGGTGAATATACCGAGATTCCCTCCGAGAAAGACTTCTTCTCCGTCGTCAAAGCCAGTGAACGCGTTGTCTGTCATTTCTTCCGCGAAAATTGGCCCTGCAAGGTTGTGGACAAGCATTTAAGTTTGTTGGCGAAGCAGCATATTGAGACCCGCTTTGTGAAAATCAATGCTGAAAAAAGTCCATTTTTAGCTGAGAGGCTCAAGATCATTGTTCTTCCTACCATTGCCCTCATAAAGAATACAAAAGTGGATGATTATGTGGTGGGTTTTGATGAACTTGGTGGCACTGACGACTTTAGCACCGAGGTTTTGGAAGAAAGATTGGCTAAAGCTCAAGTCATATTTTTGGAGGGTGAATCATCAATCCACCGTGCAAGGTCCAGTGCACAAACCAAAAGAAGTGTTCGGCAGAGCACAAAGGCAGACTCCTCAGATTCAGAGTAA 642 0.4704 MDRGKIEEVIEKQVLTVAQAVEDKIDEEIAALERLDDDDLEALRERRLQQMKKMAEKRSRWISLGHGEYTEIPSEKDFFSVVKASERVVCHFFRENWPCKVVDKHLSLLAKQHIETRFVKINAEKSPFLAERLKIIVLPTIALIKNTKVDDYVVGFDELGGTDDFSTEVLEERLAKAQVIFLEGESSIHRARSSAQTKRSVRQSTKADSSDSE 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05797 213 MobiDBLite consensus disorder prediction 191 213 - -
Trre1g05797 213 Pfam Thioredoxin 74 155 IPR013766 -
Trre1g05797 213 PANTHER THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 5 212 - -
Trre1g05797 213 Gene3D Glutaredoxin 48 181 - -
Trre1g05797 213 CDD Phd_like_TxnDC9 65 175 - -
Trre1g05797 213 SUPERFAMILY Thioredoxin-like 6 177 IPR036249 -
Trre1g05797 213 Coils Coil 18 38 - -
Trre1g05797 213 Coils Coil 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05797 Trre-Chr1 62793034 62794387 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05797 - - gmx:100814116 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05797 1 62793034 62794387 Trre1g05797 1 62793034 62794387 ECH