Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05783 ATGATCAAGTCACACCCTATTCTCACTAAAAGTGTTACTTCTGCACTCATTTATACCGCTGCTGATTTATCCTCTCAGACTATCGAGTGGCAGCCTTCAAAATCTTTTGATTTTATAAGGACTTTACGCATGGCGGGATATGGGATGATCATTTTAGGACCAACACTGCATTACTGGTTCAATTTTGTGTCAAAGCTTTTCCCGGGGAGGGATCTTTTCTCTACATTGAAGAAAATGGTCATGGGCCAGTCGATTTATGGACCTGCCATGACTGCTATTTTCTTCTCCTTGAATGCACGTTTGCAAGGTGAAAACAACAAAGAGATTGTTGCACGTTTAAAGCGTGATCTTGTTCCTACGCTGTTAAATGGAGTCATGTATTGGCCTATATGTGATTTTATTACTTTTAGATTCATCCCTGTTCATTTACAGCCATTAGTCAGCAATTCGTTTTCGTACTTGTGGACCATTTATATGACCTATATGGCGAGCCTAGAGAAAGCCGAGACAGATAGCTGA 519 0.4046 MIKSHPILTKSVTSALIYTAADLSSQTIEWQPSKSFDFIRTLRMAGYGMIILGPTLHYWFNFVSKLFPGRDLFSTLKKMVMGQSIYGPAMTAIFFSLNARLQGENNKEIVARLKRDLVPTLLNGVMYWPICDFITFRFIPVHLQPLVSNSFSYLWTIYMTYMASLEKAETDS 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05783 172 Pfam Mpv17 / PMP22 family 101 159 IPR007248 GO:0016020
Trre1g05783 172 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 2 162 IPR007248 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05783 Trre-Chr1 62684689 62687937 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05783 1 167 Miscellaneous Gene Families AT2G14860 74.251 1.21e-94 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05783 K13348 - mnt:21394771 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05783 1 62684689 62687937 Trre1g05783 1 62684689 62687937 ECH