Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05781 ATGACGGTACCGAAACGAAACTATACTCGAATAAATGTTTTGGAGCTGAAAGCGCTAATTCTTCGGAAGGTTGGTCGTCAGAGAGCTGGCAAGTACTTTGATCAGCTTGGAAAATTGGTTAGTTCAAAGATCAGCAAGACTGAGTTTAACAAGATTTGCATCATGACAATTGGGAAGGAAAATATCCCTCTTCACAATCAACTCATCAAGGGAATTCTCAACAATGTTTGTCTGGCTAAAGTCCCGCCTTTTAGAGGCTCTGCAAAAATAGGGAGTTTGAATGCTAAAGATACAAATCGGCAGCAGAGTAAATCGATGCAAATGCGGTATGGGGACGTGTTTCCTCCTTCTCTGGGAAAGGGTGGTTCTTTGGCTACCCGTGAAGGGAGGCTTGCTGGTTGTCAAAATGCGTTGGGACAATTAGGGAAGCCCCGAAACCTTGCATCTAAGGATTTGATCTATAAGACTCCAGAGCAGCAGAGTGCAACAGAACTGAATTCCCTTGGCAGTAGACCTCCTATTTCTGTTGAAGATGGAGAAGAGGTTGAACAGATTGCTGGAAGCCCGAGCATTCAAAGTAGGAGCCCAGTTACAGCTCCCCTTGGGATATCCATGAATTCCGGCTATGGACGTAGCCCTCTTTCTAATGCATCATCAAGCAGAAAGCATCCTCCAGAGACCTGTTACAACAATGGATACCTCCCTGACACGTCATCGCTGAGGAGTCGTTTGAAGCAAAAGTTGGACAAGGAGGGTTTAACTGTGACAGTTGATTGTGTCAATTTATTGAATAATGCACTGGATTCATATATGAAGAGGTTGATTGAATCCTCTATGGGTTTATCTGGGCCGAGAATCGGAAATGAGAACCAAAGACAGCGAAATGGACAGTCTCTAGCTGATTCGAATATACTGCAACCCAGAAGATATATGCAAACAGTAACACAATCTTATGGGGCATCTCTCTTGGATTTTCGTGTTGCAATGGAATTGAATCCACAGTCTCTTGGACCAGATTGGCCCACACAGCTCGAGAAGATTTGTATACGTGCTTCCGAAGAATGA 1065 0.4413 MTVPKRNYTRINVLELKALILRKVGRQRAGKYFDQLGKLVSSKISKTEFNKICIMTIGKENIPLHNQLIKGILNNVCLAKVPPFRGSAKIGSLNAKDTNRQQSKSMQMRYGDVFPPSLGKGGSLATREGRLAGCQNALGQLGKPRNLASKDLIYKTPEQQSATELNSLGSRPPISVEDGEEVEQIAGSPSIQSRSPVTAPLGISMNSGYGRSPLSNASSSRKHPPETCYNNGYLPDTSSLRSRLKQKLDKEGLTVTVDCVNLLNNALDSYMKRLIESSMGLSGPRIGNENQRQRNGQSLADSNILQPRRYMQTVTQSYGASLLDFRVAMELNPQSLGPDWPTQLEKICIRASEE 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05781 354 MobiDBLite consensus disorder prediction 185 236 - -
Trre1g05781 354 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 8 280 IPR024738 GO:0070461
Trre1g05781 354 MobiDBLite consensus disorder prediction 186 202 - -
Trre1g05781 354 MobiDBLite consensus disorder prediction 284 304 - -
Trre1g05781 354 PANTHER TRANSCRIPTIONAL ADAPTER 1 4 353 IPR024738 GO:0070461
Trre1g05781 354 MobiDBLite consensus disorder prediction 208 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05781 Trre-Chr1 62681696 62682760 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05781 - - lja:Lj5g3v2110820.1 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05781 1 62681696 62682760 Trre1g05781 1 62681696 62682760 ECH