Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05780 ATGGTGGCTGCCATTTCTCAAAACCCATTAACAACAACAACAACCTCTTCTTCAAGGTCTTCCGACAACAACAACAATGGTGTCTTACCCAGAAAAAAAGGTAGACAAATTTCTTCAAGGTATATGTCACCTTCACCTTCAACTTCAACAACAACAACAACAACTTCATCTTCAACAACAACAACTACAACTACTACAACATCTTCATCTTCTTCTTCTAGAAGATTCGCTTCACCTCTTTTGTCTCGTTCAACTAATTCATCATCAACAACACCACTTGTTGCTCCTAAACGTTCTCAGTCGGTGGACCGTCGGAGACCGAGACCAACAACCCCGGTTCCTGAAGCAACGAAGCTTCTAGTAACTTCTACTAGGAGTTTATCTGTTTCTTTTCAAGGTGAGGCTTTTTCACTTCCTATTAGTAAAAGTAAAGCTAAAGCTGTTACGCCGGAGCGACGGAGGGTTACTCCGGTCGCCGGAAAAGGAGATCAGGGTGAAAACTCTAGACCCTCGGATCAACATCGTTGGCCGGCACGGTCGAGACAGCCGAATCAGTTGTCTAGGAGTGTTGATTGTAGTGGTGGTGGTGGTGATGAGAAGAAGAAGGTTGTTGGAAAAGTTGTGCGTGCATTGCAACAATCAATGGTTATAGAGAGTGGTAGAAGAAGAGCTTCTTTTGATGGATTAGGTGGTTTGAGTTTGGATTTAGGGAAAACTACTCAATTGAATAATGAATCTTCTTTGAATTATGATGTTAATGCTTCTGATACTGATAGTGTTTCATCTGGTAGTAATTCAGGACTACATGATTCTTCTCTTGGAACTCTTAAGGTTCCGAGGGAAAATCGTGGCATTGTTGTTTCTTCAAAGTTTTGGCAGGAAACGAATAGCCGGTTGCGCCGGTTACAGGATCCTGGTTCGCCTTTGTCAACTAGTCCTGCTTCAAGGATTAGTGTTCCACCTAAGAATTCTCAATTGAAAAGGTATAATAGTGATGGTCCTGTGTTGTCGCCTCGAACAACGGCTTCTCCTATAAGGGGAAACTCGCGTCCTGCTTCTCCGAGTAAACTTTGGGCATCTGCTGCATCGTCGCCATCAAGGGGGTTTTCTAGTCCTTCTAAGGTGAGAAGTGCGGTTGCTAGCTCCATCAATAGTAATTCTGGGAATTCGCCTTCGATTCTTAGCTTCTCGGCTGATGTGAGGAGAGGGAAGATAGGGGAAGATCGGATATTTGATGCGCATACTTTGAGGCTTCTTTATAACCGGTATGTGCAGTGGCGGTTTGTCAATGCTAGGGCTGATGCTACATTCATGGTGCAGAAATTGAATGCAGAGAGACATTTGTGGAATGCATGGGTAACAATCTCAGAGCTTCGGCATTCCGTCATACTTAAAAGAATCAAACTGTTATTGCTGAGGCAAAAGTTGAAGATCACTTCTATTCTAAAGGGACAGATTTCGTATTTGGAAGAATGGTCCCTTCTAGATAGAGATCACTCCAGTTCTTTACTTGGAGCAACTGAAGCTTTGAAGGCCAGTACCCTCCGTCTTCCGGTTGTTAAAGCAACAGCTGATGTACCAAATCTGAAGGATGCTTTGGGGTCCGCAGTTGATGTTATGCAAGCAATGGCATCCTCAATATATTCTCTTTCGTCAAAGCAGGTGGAAGAAACTAATTGCTTGGTAGCGGAAATCCTAAAGGTAACCTCAAAGGAAAGATATTTGCTTCAGCAATGCAAGGATTTTTTGTCTTCCTTAGCAGCCATGCAGGTCAAGGATTGTAGCTTACGAACGCATATGTTACAACTTTCTCGTGTACCAGCAGCTTCCTGA 1833 0.4337 MVAAISQNPLTTTTTSSSRSSDNNNNGVLPRKKGRQISSRYMSPSPSTSTTTTTTSSSTTTTTTTTTSSSSSSRRFASPLLSRSTNSSSTTPLVAPKRSQSVDRRRPRPTTPVPEATKLLVTSTRSLSVSFQGEAFSLPISKSKAKAVTPERRRVTPVAGKGDQGENSRPSDQHRWPARSRQPNQLSRSVDCSGGGGDEKKKVVGKVVRALQQSMVIESGRRRASFDGLGGLSLDLGKTTQLNNESSLNYDVNASDTDSVSSGSNSGLHDSSLGTLKVPRENRGIVVSSKFWQETNSRLRRLQDPGSPLSTSPASRISVPPKNSQLKRYNSDGPVLSPRTTASPIRGNSRPASPSKLWASAASSPSRGFSSPSKVRSAVASSINSNSGNSPSILSFSADVRRGKIGEDRIFDAHTLRLLYNRYVQWRFVNARADATFMVQKLNAERHLWNAWVTISELRHSVILKRIKLLLLRQKLKITSILKGQISYLEEWSLLDRDHSSSLLGATEALKASTLRLPVVKATADVPNLKDALGSAVDVMQAMASSIYSLSSKQVEETNCLVAEILKVTSKERYLLQQCKDFLSSLAAMQVKDCSLRTHMLQLSRVPAAS 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05780 610 MobiDBLite consensus disorder prediction 296 372 - -
Trre1g05780 610 MobiDBLite consensus disorder prediction 1 97 - -
Trre1g05780 610 Pfam QWRF family 259 577 IPR007573 -
Trre1g05780 610 MobiDBLite consensus disorder prediction 1 119 - -
Trre1g05780 610 MobiDBLite consensus disorder prediction 248 272 - -
Trre1g05780 610 MobiDBLite consensus disorder prediction 177 191 - -
Trre1g05780 610 PANTHER AUGMIN FAMILY MEMBER 22 605 - -
Trre1g05780 610 MobiDBLite consensus disorder prediction 143 201 - -
Trre1g05780 610 MobiDBLite consensus disorder prediction 248 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05780 Trre-Chr1 62662723 62667745 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05780 - - gmx:100808920 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05780 1 62662723 62667745 Trre1g05780 1 62662723 62667745 ECH