Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05772 ATGGTGGTTTGCAAATGTCGCAAGGCTACTAAGCTATATTGCTTCGTGCACAAAGTTCCTGTCTGTGGAGAATGTATCTGTTTCCCGGAGCATGAAATCTGCGTGATACGGACATATTCAGAATGGGTTATAGATGGGGAGTATGATTGGCCGCCTAAATGCTGCCAATGCCAAGCCGTTCTAGAAGAAGGGAGTGGATCTCAAACTACTCGACTCGGTTGTTTGCATGTTATCCACACAAATTGCTTGGTATCACATATCAAGAGCTTTCCTCCACATACTGCCCCAGCAGGATATGTGTGTCCTTCATGTTCTACTTCGATATGGCCTCCGAAAAGTGTGAAAGACTCAGGATCACGTCTTCATTCCAAATTGAAGGAAGCTATCTTGCAGACTGGCATGGAAAAGAATATCTTTGGAAATCATCCAGTTTCGTTGTCAGTGACAGAATCACGTAGTCCTCCACCTGCTTTTTCTTCTGATCCATTGATTAGTAGGGAAAATCTTGGAAACTCAGCGTCAGTAGATGGACCAGAACTTTCTAGAATTTCAGTTACAGATATTGTGGAGATAGATGGTGCTAATTCAGGAGGAAATTTCATGAAAAGCTCAAGTCCAGTTGCCCCTGGTGCTACCACAAGGAAAGGATCACTCCATGTTGACCGGCAAAACTCTGAAATCTCGTACTATGCTGATGATGAAGATGCAAAGCGCAAAAAGTACACAAAAAGAGGTCCATTCCACCACAAGTTTCTTAGAGCATTGCTTCCTTTCTGGTCCAGTGCTTTGCCTACTCTTCCAGTGACTGCACCTGCAAGGAAAGATGGATCAAATGCAGCCGAAACCTCAGAAGCCCGTACACGGCATCAAAAGTCATCAAGGATGGACCCCAGAAAAATTCTTCTACTGATTGCAATCATGGCATGCATGGCAACTATGGGTATATTGTATTACAGACTAGTACAGCGGGGTCCCGGGGATGAGCTTCTTAATAATGATGAATAA 1005 0.4398 MVVCKCRKATKLYCFVHKVPVCGECICFPEHEICVIRTYSEWVIDGEYDWPPKCCQCQAVLEEGSGSQTTRLGCLHVIHTNCLVSHIKSFPPHTAPAGYVCPSCSTSIWPPKSVKDSGSRLHSKLKEAILQTGMEKNIFGNHPVSLSVTESRSPPPAFSSDPLISRENLGNSASVDGPELSRISVTDIVEIDGANSGGNFMKSSSPVAPGATTRKGSLHVDRQNSEISYYADDEDAKRKKYTKRGPFHHKFLRALLPFWSSALPTLPVTAPARKDGSNAAETSEARTRHQKSSRMDPRKILLLIAIMACMATMGILYYRLVQRGPGDELLNNDE 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05772 334 MobiDBLite consensus disorder prediction 269 293 - -
Trre1g05772 334 ProSiteProfiles Zinc finger RING-type profile. 54 105 IPR001841 -
Trre1g05772 334 PANTHER ZINC FINGER PROTEIN-LIKE 1 1 325 IPR039043 -
Trre1g05772 334 MobiDBLite consensus disorder prediction 149 172 - -
Trre1g05772 334 MobiDBLite consensus disorder prediction 279 293 - -
Trre1g05772 334 SUPERFAMILY RING/U-box 53 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05772 Trre-Chr1 62590986 62594977 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05772 - - tpra:123881838 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05772 1 62590986 62594977 Trre1g05772 1 62590986 62594977 ECH