Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05752 ATGTTAATGGCACTAACAGTTACAGTAAACAAGTATGCATCATCAAATATGCAAGCAGTTCATAATAGAAAACAAGCTAAACCAACCTTAAGTAGCACCAACGTTGGATTTGGAAGGAGAGCACTTGTCTTATCCACTGTTGTTGCTGCTACAACTCAAGACCCTGAATCAAGGACTCTACTTCTTCAAAAATATTTGAAGAAGACAGAGGAAAACAAGGAGAAAAATGACAAAGAGAGAGTGGATAGCTATTACAAACGTAATTACAAGGATTACTTTGAATTCATAGAAGGGAGTTTGAGAGCAAAAGAAGATGGGAAGCTTTCAGAAGCAGAAAAGGGTATTCTTGATTGGCTTGAAGCTAACAAGTGA 372 0.371 MLMALTVTVNKYASSNMQAVHNRKQAKPTLSSTNVGFGRRALVLSTVVAATTQDPESRTLLLQKYLKKTEENKEKNDKERVDSYYKRNYKDYFEFIEGSLRAKEDGKLSEAEKGILDWLEANK 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05752 123 Coils Coil 122 123 - -
Trre1g05752 123 PANTHER UNNAMED PRODUCT 3 123 - -
Trre1g05752 123 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 26 83 IPR008796 GO:0009522|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05752 Trre-Chr1 62421888 62422604 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05752 - - gmx:100800755 155.606
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05752 1 62421888 62422604 Trre1g05752 1 62421888 62422604 ECH