Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05745 ATGCTAATTAGGAGTTCGATTTCATTTGTGACTTTTGGTTTATCAAGAATCACCTGTTCTTCCTCCTCTCGGCAGCGCAGATATTCTTCGGAATCCCGTCAATTCTTCAGCCTCTTACCAATACCACCACAACTCGAGAATTGGGAGGACTTGCCAAAACCAAACCAAACCAAACAAAGAGACACTCACAATCAAATCAACAGCACCATGAAACTCAGACTCAGATCATTGGAAACCAAAGAAACCCTAAAAATCGAAGTTCCCGATCCATGTTCCATTCACCAACTCAAATCCATTCTTTCTACCACCATCCCTTCTCCTTCATCTTCTTCTTCTCTCCATCTCTCTCTCAACAGAAAAGACGAAATCAATGCTTCCTCTCCTAAAGATAACGAATCCCTCCACTCTCTTGGCATTGCCGCCGGCGATCTCATCTTCTACACCTTCAACCCCAACGCTTTCTCCCGTGAAACCCTCCCTCACAAACCCACCCCACAACAACAAACAAACGACAACGACCCACCCATCATTCAAAACTCCCCGGAAATCACCATGACCGACGCTCATTCGACTCCCATGAAAGAAAAGTTTCCATCTTTGGAAACCCCAGAACCGCAAATGATGGAAATCGTTGATGGGTCTGATGAGTCAGTGTTGGCGATGAAGAACAGTTCAGAACCTGATTTTGTGAAAAGGGTTCTTAGAGAAGCGCTTGGAGATGATGTTAATGATTTCAAGCTACTGGTATTTGCTGTGCATGCTGTTATTCTTGAATCTGGGTTTGTTCGTGTTGATCAAGTTTCGGGTATGGCGATTAGTTGCTCTCATCTTGTTGATAACATGTCTTCTTCTTCAATGATATCTTTGAGGTATACTCTTCCTGAGATTCTTACTAATGGTTCATCTCATTCCGTGACTTTGAAAATTCAGACATTAGGGAGTTTTGTGAATGTTTATGGTTCTTTGTCTGATGATGTTGGTTCAAGGGTTCATAGTGTTTATTTAGATAAATCTAGATTTGCTAGGCCTTTAGAATTGATGATGCTGTCAAATTCTGAATCTAATGCTAGTGCTAGTGTTAGTGTTAATGATGATGGAGATGAGGTTTTTGAATTTTGGAAGATAGTGAAAGATAGGCTTGTATTGCCACTTTTAATTGATCTTTGTGATAAAGCTGGATTGGATCTTCCACCGTGTTTTATGCGGCTTCCCATGGAACTTAAGCTCTTGATATTTGAGTATCTTCCCGGTGATGATTTGGCCAAAGTGTGTTGCACATGTTCTGAATTGCAATACCTTGCCTCAAATGATGAGTTGTGGAAGAAGAAGTTTGAGGAGGAGTTTGGACAAAGGACGAATGGTATGAAGTTTTTTAAGAACTTGTATGCTATTTACAGGGCGACAAAGAAGAAAGCAGAGGAGCCGCTTCCTTTTCGAATTCCTCGAACTGGTATCATGAGATACTTTCAAAGGAGGAGGAGAGGTCGTAGTAATCGTTTTGTAAGGCCTCCAATTTGGGGTGGAGAGTATGATCTGCAGCCAGATTTTGGTGTAAATTTCCCCGGATACATGCAAAGGCGAACTTTCATTCCCCCATGTCATCTGGGAGGATTTTAA 1617 0.4174 MLIRSSISFVTFGLSRITCSSSSRQRRYSSESRQFFSLLPIPPQLENWEDLPKPNQTKQRDTHNQINSTMKLRLRSLETKETLKIEVPDPCSIHQLKSILSTTIPSPSSSSSLHLSLNRKDEINASSPKDNESLHSLGIAAGDLIFYTFNPNAFSRETLPHKPTPQQQTNDNDPPIIQNSPEITMTDAHSTPMKEKFPSLETPEPQMMEIVDGSDESVLAMKNSSEPDFVKRVLREALGDDVNDFKLLVFAVHAVILESGFVRVDQVSGMAISCSHLVDNMSSSSMISLRYTLPEILTNGSSHSVTLKIQTLGSFVNVYGSLSDDVGSRVHSVYLDKSRFARPLELMMLSNSESNASASVSVNDDGDEVFEFWKIVKDRLVLPLLIDLCDKAGLDLPPCFMRLPMELKLLIFEYLPGDDLAKVCCTCSELQYLASNDELWKKKFEEEFGQRTNGMKFFKNLYAIYRATKKKAEEPLPFRIPRTGIMRYFQRRRRGRSNRFVRPPIWGGEYDLQPDFGVNFPGYMQRRTFIPPCHLGGF 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05745 538 MobiDBLite consensus disorder prediction 156 176 - -
Trre1g05745 538 Gene3D - 64 161 - -
Trre1g05745 538 PANTHER F-BOX PROTEIN SKIP22 70 538 - -
Trre1g05745 538 SMART fbox_2 403 443 IPR001810 GO:0005515
Trre1g05745 538 Pfam F-box-like 402 442 IPR001810 GO:0005515
Trre1g05745 538 Gene3D - 225 399 - -
Trre1g05745 538 Gene3D - 400 494 - -
Trre1g05745 538 MobiDBLite consensus disorder prediction 46 67 - -
Trre1g05745 538 ProSiteProfiles F-box domain profile. 397 443 IPR001810 GO:0005515
Trre1g05745 538 CDD F-box_AtSKIP22-like 399 444 - -
Trre1g05745 538 SUPERFAMILY F-box domain 397 457 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05745 Trre-Chr1 62384003 62387235 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05745 K10293 - gmx:100796338 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05745 1 62384003 62387235 Trre1g05745 1 62384003 62387235 ECH