Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05738 ATGTCCATGGTTTTGAAGTCAATGACTGCTTCATCTCTGAGACAATCTAGTACTATATTTGTAAACCCTTTGAATCATCGTATTTCAAATCTTGGATTTTGTTTCAAGGGAGAACAGAAATGGAAAAATGGGTTTAAGGTTTCAGCAACATTAGAAGTGGGTGTGGAGGGTTTAAAAAGAACAACAAGCAATGTTATTCCATTGGAAGAAGAAGGAACATTGGGTTTGGATATGGTTTCAGAAGGAGATTTAATGGTGAAGGGTTTTAAAGGGTTGAGGAAGACAAAGCTTGTTTGCACGGTTGGTCCTGCTTGTAGTTCATTGGAGGATTTAGAGAAGTTAGCATTAGGAGGAATGAATGTTGCAAGGCTTAATATGTGTCATGGTACTAGAGAATGGCACCGTGATGTTATTAGGAAGATTAAGAAGTTGAATGAGGAAAAGGGTTTTTCTGTTTCTGTTATGATTGATACTGAGGGTAGTCAGATTCATGTTGTTGATCATGGTGCACCTTCCTCGGTTAAAGTTGAGGAAGATTCAATCTGGTTGTTTACTGCTGATAAATATGAGGGTTCTCGTCCATTGACATTTCAAGCAAACTATCCAGGTTTTTCCAAAGGCATTGAAGTAGGTGATGAACTTGTTATTGATGGTGGAATGGCATGCTTTGTAGTCACTGAAAAAATCGGAAAGGATTTGCATTGTAAGTGCACAGATGCTGGTCTTTTCTTACCTGGAGCCAAATTTAGTTTCTGGAGAGATGGAAAGCTTGTAAGGAGGAATTACAATCTCCCTACAGACCGTACTCTATCAACTAAGGATTGGGCTGACATTAACTTTGGTATAGCCGAGGGTGTTGATTTTTTTGCCCTATCCTTTGTCAATCATGCCGACTCTGTTAAGGATTTAAAGAAATACCTCTCTGGCAAATCAACCAAATCCATAAAAGTAGTGGCAAAGATAGAAAGCTTAGAATCTCTTCATCATCTGGAGGAAATAGTGAAAGCTTCTGATGGAATCATGGTAGCTCGTGGTGACCTTGGAGTCGAAATACCACTTGAACAGATCCCTACAGTCCAGGAGGATATAATTAACATTTGCAGACAGCAAAATAAGCCAGTGATTGTAGCTTCTCAGCTTCTTCAGTCAATGGTTGAGTATCCAACACCAACTCGTGCCGAGGTAGCGGATGTTTCTGAAGCGGTTCGACAGTATGCGGATGCTTTGATGTTATCTGCCGAGTCAGCTATTGGTTCATTTGGACAAAAATCATTGGCAGTGTTGGATATGACTAGCAGTAGAATGGAATCATGGAGTAGGGAGGAAAACAGACAAAGTCTTCTCAATCACGATAAACTTGGAGCATCATTGCCAGATTGCATCACTGAGCAAATATGCAATTGTGCCGTTGAAATGGCCAATAAACTTGGTGTGGATGCAATCTTTGTTTACACAAAGCATGGATACATGGCATCATTACTATCACGCAACCGACCAGATCCTCCCATCTTTGCTTTCACCGATGACGAGAGTACTCGGATGGCTCTGAATTTGCAATGGGGTGTTGTACCACTTCTTGTTGATTTATCAGATGATGCTGAATCCAACATCTCAAAATCAGTTCAGCTAATGAAATCTAAAGGATTGATCAACAAAGGAGATGTTGTACTAGTGGTCTCAGATGTTGCTCCAACACGTTCAACTCCCATGGCTCTCCAATCAATTCAGGTTAAAACCATTATCTAG 1746 0.4032 MSMVLKSMTASSLRQSSTIFVNPLNHRISNLGFCFKGEQKWKNGFKVSATLEVGVEGLKRTTSNVIPLEEEGTLGLDMVSEGDLMVKGFKGLRKTKLVCTVGPACSSLEDLEKLALGGMNVARLNMCHGTREWHRDVIRKIKKLNEEKGFSVSVMIDTEGSQIHVVDHGAPSSVKVEEDSIWLFTADKYEGSRPLTFQANYPGFSKGIEVGDELVIDGGMACFVVTEKIGKDLHCKCTDAGLFLPGAKFSFWRDGKLVRRNYNLPTDRTLSTKDWADINFGIAEGVDFFALSFVNHADSVKDLKKYLSGKSTKSIKVVAKIESLESLHHLEEIVKASDGIMVARGDLGVEIPLEQIPTVQEDIINICRQQNKPVIVASQLLQSMVEYPTPTRAEVADVSEAVRQYADALMLSAESAIGSFGQKSLAVLDMTSSRMESWSREENRQSLLNHDKLGASLPDCITEQICNCAVEMANKLGVDAIFVYTKHGYMASLLSRNRPDPPIFAFTDDESTRMALNLQWGVVPLLVDLSDDAESNISKSVQLMKSKGLINKGDVVLVVSDVAPTRSTPMALQSIQVKTII 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05738 581 PANTHER PYRUVATE KINASE 88 561 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Trre1g05738 581 Gene3D - 429 574 IPR036918 -
Trre1g05738 581 Pfam Pyruvate kinase, alpha/beta domain 463 562 IPR015795 -
Trre1g05738 581 SUPERFAMILY PK C-terminal domain-like 457 564 IPR036918 -
Trre1g05738 581 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 87 439 IPR015813 GO:0003824
Trre1g05738 581 NCBIfam pyruvate kinase 93 567 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Trre1g05738 581 Gene3D - 95 428 IPR040442 -
Trre1g05738 581 ProSitePatterns Pyruvate kinase active site signature. 315 327 IPR018209 GO:0004743|GO:0006096
Trre1g05738 581 Gene3D - 162 264 IPR015806 GO:0004743|GO:0006096
Trre1g05738 581 FunFam Pyruvate kinase 431 571 - -
Trre1g05738 581 Pfam Pyruvate kinase, barrel domain 93 437 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Trre1g05738 581 SUPERFAMILY PK beta-barrel domain-like 163 246 IPR011037 -
Trre1g05738 581 FunFam Pyruvate kinase 269 435 - -
Trre1g05738 581 PRINTS Pyruvate kinase family signature 344 368 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Trre1g05738 581 PRINTS Pyruvate kinase family signature 317 343 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Trre1g05738 581 PRINTS Pyruvate kinase family signature 413 429 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Trre1g05738 581 PRINTS Pyruvate kinase family signature 369 393 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Trre1g05738 581 PRINTS Pyruvate kinase family signature 394 412 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Trre1g05738 581 PRINTS Pyruvate kinase family signature 286 300 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Trre1g05738 581 PRINTS Pyruvate kinase family signature 150 166 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05738 Trre-Chr1 62342881 62346642 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05738 K00873 - gmx:100780644 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05738 1 62342881 62346642 Trre1g05738 1 62342881 62346642 ECH