Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05515 ATGAAACAATGGAGTTGCTGCAAGAAAAGAAGTCATGATTTCAGCTTATTTTTGCAAATTCCAGGATGTAAGACGGGAAAACATACGGCAGAGAAGCAAGTAATTGCACCGGCTAAGAAAAAGCCTGCACCCCCTCCAACTGCAGCTCCCTCAACCAATGCCAATCCATCGATGAAGGACTCTTGTTCTAGGTGTCGGCAGGGTTTCTTTTGCTCAGATCATGGTGTATCGCAAAGCAAACCTGTAACTATTGTTGGAGAGAAATCTGTAAGTCTTGCTGGAGATGCATCTGCAGAAAACAATTCAAGCGTTGAGGTTTTGAAACCTCATAAAAAGATAGTTGGCATAAATGAGCCGCAAATATGCAAAAATAAAGGATGCGGTCAAACTTTCAAGGAAAAAGATAATCACGACACTGCTTGCAGTTACCATCCTGGCCCTGCTGTTTTTCACGACCGGATGAGAGGGTGGAAGTGCTGTGATGTTCATGTAAAAGAATTTGACGAGTTTATGAGCATTCCTCCTTGCACAAAGGGATGGCATAATGCCGATCCAGTGTCGTGA 564 0.4344 MKQWSCCKKRSHDFSLFLQIPGCKTGKHTAEKQVIAPAKKKPAPPPTAAPSTNANPSMKDSCSRCRQGFFCSDHGVSQSKPVTIVGEKSVSLAGDASAENNSSVEVLKPHKKIVGINEPQICKNKGCGQTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDVHVKEFDEFMSIPPCTKGWHNADPVS 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05515 187 ProSiteProfiles CHORD domain profile. 122 181 IPR007051 -
Trre1g05515 187 MobiDBLite consensus disorder prediction 29 59 - -
Trre1g05515 187 Gene3D - 114 184 - -
Trre1g05515 187 Gene3D - 1 32 - -
Trre1g05515 187 FunFam Cysteine and histidine-rich domain-containing protein RAR1 113 184 - -
Trre1g05515 187 ProSiteProfiles CHORD domain profile. 1 28 IPR007051 -
Trre1g05515 187 PANTHER CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN RAR1 1 186 IPR043316 -
Trre1g05515 187 Pfam CHORD 1 28 IPR007051 -
Trre1g05515 187 Pfam CHORD 121 181 IPR007051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05515 Trre-Chr1 60568921 60569782 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05515 K13458 - gmx:100194419 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05515 1 60568921 60569782 Trre1g05515 1 60568921 60569782 ECH