Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05509 ATGAAAGAGGTTCTTCTTCTTGTTGTGCTCTCGCTGGCCTTTCAATTGACCCTCTCAGTATCAGTGTTTGAGTTCCAATCTGCTTCTCTACTGCCTCATGCTAATGAATCCTTCAATATCAGTTATATTCAGATGAAGAACGCTGCAAGTTGTTCTTACTCGGTGGTTATATCTACTAGTTGTTCTTCTCCTAGGTATACAACGGATCAAATCAGTATTTCTTTTGGAGATGCTTATGGGAATCAGATATATGCACCAAGATTGGATGATCCATCTTCTGGTACATTTGAGAGTTGTTCTTCAGATACATTTCAGATAAATGGTCCATGCGCATATCAGATATGCTATGTGTACCTCTATAGATCTGGCTCGAATGGTTGGAAACCTGACACTGTGAAAATCAATGGTTATAATGGCAGACCTGTTACTTTCTACTACAACACTTTCATTCCCAGAGATACTTGGTATGGGTTTGATTTGTGCTACAATGCTGCTTCTTCATACAAAGTAACTGCTCAGAAAAGTCTAATATTAGTAATTCTGGGATTTGTTATAAGTTTTTGGTTGTAA 570 0.3789 MKEVLLLVVLSLAFQLTLSVSVFEFQSASLLPHANESFNISYIQMKNAASCSYSVVISTSCSSPRYTTDQISISFGDAYGNQIYAPRLDDPSSGTFESCSSDTFQINGPCAYQICYVYLYRSGSNGWKPDTVKINGYNGRPVTFYYNTFIPRDTWYGFDLCYNAASSYKVTAQKSLILVILGFVISFWL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05509 189 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 8 164 - -
Trre1g05509 189 CDD PLAT 51 161 - -
Trre1g05509 189 Gene3D PLAT/LH2 domain 47 158 - -
Trre1g05509 189 Pfam Embryo-specific protein 3, (ATS3) 43 161 IPR010417 -
Trre1g05509 189 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 50 158 IPR036392 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05509 Trre-Chr1 60522181 60524036 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05509 - - gmx:100305495 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05509 1 60522181 60524036 Trre1g05509 1 60522181 60524036 ECH