Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05477 ATGACAGAGATCGTAGCGCGGAAGAGAAAAATGGGAGACAGAAAGGATAAAACTGCGCCAAAATGGCCTTCCATCAAACCCAAAAACAATCTTCACGTTACTCGTTTGCGAGATTTCGATCTCTTCACGGTTCAGAATTTTTTCTCATCTGCTGAATCAAAGGCATTCATTGAAACTGCTGAGGGAATCGGTTTTTCTCATCAAGGTAGTTTAGGTCCAGCAAAAGGTGAAGCTTATAGAGATAATGATCGAATCTCGGTGAATGATCCTGTTCTTGCTGATTCAATTTGGGATTCTGGACTTAGTAAACTGTTTTCTGATTTAAGAATTCGAGGGAAAGCCGCTGTAGGTTTGAATCCAAATATTAGATTATATAGGTACAAGGTTGGTCAAAGGTTTGGAAGACATATTGATGAAAGTAATGATCTTGGAGATGGAAAAAAGACTCGTTATACTTTGCTTGTTTATTTAAGTGGTGGACCTGGTGAACTTAAATCAAAGGCTAAAAATGATTCCAATAAACCTACAGATTCATCAATTGATCGTTTAGTTGGAGGAGAAACAGTGTTCTATGGTTCAAGAAATAGCATTGTAGCTGAGGTTGCTCCCGTTGAAGGGATGGCACTGTTGCACATTCATCGAGATAAATGCTTGTTGCATGAAGCCAGAAATGTTACAAAGGGTGTCAAATATGTGTTTCGTTCGGATGTTGTATTTGCTTGA 723 0.3873 MTEIVARKRKMGDRKDKTAPKWPSIKPKNNLHVTRLRDFDLFTVQNFFSSAESKAFIETAEGIGFSHQGSLGPAKGEAYRDNDRISVNDPVLADSIWDSGLSKLFSDLRIRGKAAVGLNPNIRLYRYKVGQRFGRHIDESNDLGDGKKTRYTLLVYLSGGPGELKSKAKNDSNKPTDSSIDRLVGGETVFYGSRNSIVAEVAPVEGMALLHIHRDKCLLHEARNVTKGVKYVFRSDVVFA 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05477 240 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 38 234 IPR045054 -
Trre1g05477 240 Gene3D q2cbj1_9rhob like domain 28 235 - -
Trre1g05477 240 SMART p4hc 39 238 IPR006620 GO:0005506|GO:0016705|GO:0031418
Trre1g05477 240 Pfam 2OG-Fe(II) oxygenase superfamily 123 232 IPR044862 -
Trre1g05477 240 MobiDBLite consensus disorder prediction 1 22 - -
Trre1g05477 240 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 117 240 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05477 Trre-Chr1 60284078 60285679 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05477 - - mtr:11422845 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05477 1 60284078 60285679 Trre1g05477 1 60284078 60285679 ECH