Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05448 ATGAATTCTAGAAGAGATGTTGAAAGTGGAGGAACAAAAAACAGAACAGGGGACAACAACAACAACGATTACTCTGCACCACCTGCTTCTTCTTATGCTTATGATGCTGAAAATCATCATAGGAATTCATGGCTTGTACCTCTTTTTGTGTTTGTTAATGTTGTTGTTTTTATTGTAGCCATGGGCATCAACAATTGTCCCCATAACAATTTTGGTTTTCAAGGTGATTGTGTTGCTAGGTTCCTTGGCAGATTCTCTTTTCAGCCTCTCAGAGAGAATCCATTACTTGGTCCTTCTTCCTCAACATTAACCAAAATGGGAGCTCTTAGATGGAATAATGTAGTGCACCAGCATCAGGGATGGAGACTTTTCACTTCTTTTTGGTTACATGCTGGAATTATTCATTTGGTATCAAATATGGTGAGCCTTGTGTTCATCGGAATTCGCCTCGAACAGCAATTCGGGTTTCTGAGGATTGGATTGATATACCTATTATCTGGATTTGGTGGAAGTGTTCTTTCTTCTCTTTTTATTAGAAATAGCATCTCTGTTGGTGCCTCTGGTGCCCTCTTTGGACTCCTTGGAGCAATGCTATCCGAACTTCTTACAAATTGGACTATATATTCCAATAAAGTGATGGCCTTGTTCACCCTTCTCATTATCATTGTCATCAACCTTGCGATAGGCATTTTGCCGCATGTTGATAACTTTGCTCACATTGGGGGATTTGTGGTAGGATTTCTCCTTGGTTTCATTTTACTGCCACGTCCTCAATACGGTTGGTTAGAGCAGCGACGTCTTCCTGCTGGTATTCGTCTCAAGTCAAAATTCAAAGCTTACCAATATGTTCTAGGGATTGTCTCTCTAATTCTCTTGATTATTGGGTTATCAGTTGCAACTGTGATGCTGTTCAAGGGAAAGAATGGATATGATCACTGCCATTGGTGTCATTACCTAACATGTGTGCCAACCTCTAAATGGGAATGCAACAATGACAATTAA 1002 0.4012 MNSRRDVESGGTKNRTGDNNNNDYSAPPASSYAYDAENHHRNSWLVPLFVFVNVVVFIVAMGINNCPHNNFGFQGDCVARFLGRFSFQPLRENPLLGPSSSTLTKMGALRWNNVVHQHQGWRLFTSFWLHAGIIHLVSNMVSLVFIGIRLEQQFGFLRIGLIYLLSGFGGSVLSSLFIRNSISVGASGALFGLLGAMLSELLTNWTIYSNKVMALFTLLIIIVINLAIGILPHVDNFAHIGGFVVGFLLGFILLPRPQYGWLEQRRLPAGIRLKSKFKAYQYVLGIVSLILLIIGLSVATVMLFKGKNGYDHCHWCHYLTCVPTSKWECNNDN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05448 333 Gene3D - 37 256 IPR035952 -
Trre1g05448 333 SUPERFAMILY Rhomboid-like 39 258 IPR035952 -
Trre1g05448 333 MobiDBLite consensus disorder prediction 1 26 - -
Trre1g05448 333 FunFam RHOMBOID-like protein 39 256 - -
Trre1g05448 333 Pfam Rhomboid family 115 257 IPR022764 GO:0004252|GO:0016020
Trre1g05448 333 PANTHER RHOMBOID-RELATED 15 329 IPR002610 GO:0004252|GO:0006508|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05448 Trre-Chr1 60041979 60043767 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05448 - - gmx:100784224 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05448 1 60041979 60043767 Trre1g05448 1 60041979 60043767 ECH