Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05438 ATGCTCGAATTGGTTCTGTTGTACAAGAACACATTGCTCCACGCATCACTCACCATCATCCTCACCATAACCCTATCTTTCTTCAGAATCCCAATCCTCTTCCTCTACGCTCTCCAAACCTACATCCACCCCGATTCCCAACCCCAATCCAATGGTCTCAAAGCCGCCATTCGCCGCCCTGGAGCCGACCCTTCTTCCACCGAGCTAAGAAAGAGGAACAAGTCAAAGGACAAAGTCGATTTCGACGAAAACAATGCTCAGATCTTCAGAATAAAGCTCGATCATAGTCACCTTCAATCTCGTCTTTACATCGATCAGTATATCGTTGCTTTTACTGTTTCTTTTGTTGCCCTTTTTTCTCTTTTGCTTCATCATTTTTTGGATTGCTCAGAGAATAATGGGTTGTTGGCAAATGGTGTTTTTGTTCCGATTCTGCTATCAATTTTCAGTCTTTATACTTGGGGTATGCTGCTTTTTAAGGTTACGTTTGAGCGATCTGCGTCTAGAAGATCAGAGAAACAATTAAGCGTTGTTTTTGGGGTTTTAGGGGTTTTTTTAGGGTTGCTTTTTGTTCCTGAGGTTGCTTCTTTGGTTTTGGATTTTGATTTTGGGGTTTCTGTTGATGGGTTTTGGAGGGTTTTTATATCTGCAATGATGGGTTGTCTTGCTTGTTTCTTGTTCATTCCTTCTGTAAGAAGTGCTCGATCGTTTTGGCTTGGAACCGATCAGCTTCGTTGCAATTTGTCTATGATAACTTGTGGATTTTATAACCGTGTGATCCTTTATGCAAATCAAATCTTGCTTATTTTTGTGGCTTTTCTATGGATTACTCCGTTGTCTGAAGTTTTCATAAACAAAAACTACAATTACAGTAAGGGAAATAGTGCAACAATGAGGGAAGTTGGTAATGCTGAGAGATTGGTAGGGAATATGGGGTTTCTGTCATCTGATTTTGGCAACTTTCGGCGCTGGTGCTTATTGGGGTCGAGTTTGTTGCAGATTGTGGCTTTAAGGGCTAATATGCAAATGTATCTCAATGAAGCTTTGCTGTCTTGGTACCAAAGGCTTCATGGTAGCAAGGTTCCTGACTTGGATTATAGTAGAGCGAAGATGTTCCTGCATAATCACTATTTGTGCCTTGTGGTTTTGCAATTTCTTGGGCCTCCTGTTTTGGTACTTATCTTTCTTGGCTTGTCTCAGATTGATGGTCCTTCCTTTGGAAAATTTCCGTTGGCATTGCCTAGCTCTGCTTTTTTCAAGGAGGTTGCATTGTTTTTGGCTTGGTGGGTAACCTTTCTGTGGGCAGTATTCTCGTCGGTGATCCTTTTGCTGCATCGCCATTGTATTTTGTATGTTTCTTGA 1362 0.4148 MLELVLLYKNTLLHASLTIILTITLSFFRIPILFLYALQTYIHPDSQPQSNGLKAAIRRPGADPSSTELRKRNKSKDKVDFDENNAQIFRIKLDHSHLQSRLYIDQYIVAFTVSFVALFSLLLHHFLDCSENNGLLANGVFVPILLSIFSLYTWGMLLFKVTFERSASRRSEKQLSVVFGVLGVFLGLLFVPEVASLVLDFDFGVSVDGFWRVFISAMMGCLACFLFIPSVRSARSFWLGTDQLRCNLSMITCGFYNRVILYANQILLIFVAFLWITPLSEVFINKNYNYSKGNSATMREVGNAERLVGNMGFLSSDFGNFRRWCLLGSSLLQIVALRANMQMYLNEALLSWYQRLHGSKVPDLDYSRAKMFLHNHYLCLVVLQFLGPPVLVLIFLGLSQIDGPSFGKFPLALPSSAFFKEVALFLAWWVTFLWAVFSSVILLLHRHCILYVS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05438 453 MobiDBLite consensus disorder prediction 47 77 - -
Trre1g05438 453 PANTHER RE42071P 11 451 IPR019395 -
Trre1g05438 453 Pfam Predicted transmembrane protein 161AB 211 395 IPR019395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05438 Trre-Chr1 59945462 59946823 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05438 - - gmx:100793355 662.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05438 1 59945462 59946823 Trre1g05438 1 59945462 59946823 ECH