Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05435 ATGACAGAGTCTGGGGAAGGGTTGGATCTGTTATGGATCTATATTAGTTGCAGGGGACGTGTGAGGTGGGATGAAGCTAATATTGGAAACATTGAGGCAAACAAACCTGTGAGGCAAAAAATTACCGAGCCTAAGACTCCGTATCATCCCATGCTGGAAGATGACAGCTCTCCATCTCCTGGAAGAAGAGGGTATGATGAATGTGTTGAAGAGAAAACCGACCCAGCAAATGCTGAAGAAACTGCTTTTGATAAAGCTACCTGTTGCAGCAGAAAAAAAACTAGGCAATCGGATGATGGCTGGACTTCATCCGAGGATGAGGCAGAAACAGTAGAGCTAATTGATGAAGATGCAAGTTGTAGTTTTAAAGAGCACCGAAGGGCCCACTATGATGAATTCCTTAAAGTCAAAGAACTGAGACAGCAGACTGCTCTTCTAGAGAATGGAAGTGACGAGGAAAATAATACCGAGCTTGCTGAGGAGAAGAAATCCCACTCTGATTCACCTTCTCCAGTAAGTGCCAAGTAA 528 0.4413 MTESGEGLDLLWIYISCRGRVRWDEANIGNIEANKPVRQKITEPKTPYHPMLEDDSSPSPGRRGYDECVEEKTDPANAEETAFDKATCCSRKKTRQSDDGWTSSEDEAETVELIDEDASCSFKEHRRAHYDEFLKVKELRQQTALLENGSDEENNTELAEEKKSHSDSPSPVSAK 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05435 175 Pfam Protein phosphatase inhibitor 2 (IPP-2) 21 147 IPR007062 GO:0004864|GO:0009966|GO:0043666
Trre1g05435 175 MobiDBLite consensus disorder prediction 59 83 - -
Trre1g05435 175 MobiDBLite consensus disorder prediction 37 83 - -
Trre1g05435 175 MobiDBLite consensus disorder prediction 144 175 - -
Trre1g05435 175 PANTHER PROTEIN PHOSPHATASE INHIBITOR 18 167 IPR007062 GO:0004864|GO:0009966|GO:0043666
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05435 Trre-Chr1 59931932 59933306 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05435 K16833 - gmx:100788300 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05435 1 59931932 59933306 Trre1g05435 1 59931932 59933306 ECH
Trre11g01358 11 13292978 13296135 Trre1g05435 1 59931932 59933306 PCT