Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05428 ATGGATGACGTTGATTCGAGCACGAGGAGATGGGAGGATCTGGACACGGATATTTTGGTGAAGATTTTTCAGTTGCTTGACATATTTGAGTTAACATCTGGCATTGCTCATGTTTGTAGTGCATGGCGCATGGCTTGTTGCGATCCACTTCTTTGGAAGACACTTGATTTGTCAATATTAAGATCTAATTTCATCAAGATTCCATTAGAGCCATTTGTTTACGTGGATGAACGATCTGATAAGAAATTGACCCGTTTATTAAAGATTTCCTTGAACCTCAGCAAGCAGAGTATACTGACACTGATCTTCCATTTCAACTTGTACGTAAGTGATGATCAGTTGACATACACTGCTGAAAGATGCCCACAACTCAAACGACTAGTTCTGCCGGCTTGGAACAGAATTAAGAGAACAGGAATGTGCAAGGCTATCCGTTGCTGGAAAGAGCTGGAGTCTGTGACAATGCCTAGTATTGCAAACCCGCCATATTTTCTAGAGGAAATTGCAACGCACTGCAAGAACTTCAGAGAACTCAAGATTATGGGGCCATGTGACATGTTCTTTGCTTCAACTCTGGCTGCATTTGTTCCAAAGTTGAGAGTCTTGAGCCTTCGTTGCACAGCACTATACAGGGATGCTCTCATTCTCATCCTAGACGGCTTAGAACATTTAGAAGTGCTCAACATATCACATTGCATTCTAATGGAAGGCCCTCCTCCTCAACCTAAAAAGATTATCAAAAAAATTGATCCCATTGTTCGCCAGAAGGCTTCTCGGTTGCGTGAATTTATCACATGCATGGAAGATTCGTGCATCATGTGCCAACGAACAAGAACTGATGAAGGGATAGTTAGGTGGTACAAGTACGAGGAATGGTTTTGGAAAGACGATGAGGTGAAGGCTCTTGCACTTTAA 915 0.423 MDDVDSSTRRWEDLDTDILVKIFQLLDIFELTSGIAHVCSAWRMACCDPLLWKTLDLSILRSNFIKIPLEPFVYVDERSDKKLTRLLKISLNLSKQSILTLIFHFNLYVSDDQLTYTAERCPQLKRLVLPAWNRIKRTGMCKAIRCWKELESVTMPSIANPPYFLEEIATHCKNFRELKIMGPCDMFFASTLAAFVPKLRVLSLRCTALYRDALILILDGLEHLEVLNISHCILMEGPPPQPKKIIKKIDPIVRQKASRLREFITCMEDSCIMCQRTRTDEGIVRWYKYEEWFWKDDEVKALAL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05428 304 Gene3D Ribonuclease Inhibitor 69 261 IPR032675 -
Trre1g05428 304 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 8 248 - -
Trre1g05428 304 SUPERFAMILY RNI-like 108 237 - -
Trre1g05428 304 SUPERFAMILY F-box domain 11 61 IPR036047 GO:0005515
Trre1g05428 304 Gene3D - 5 56 - -
Trre1g05428 304 Pfam F-box-like 16 57 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05428 Trre-Chr1 59878308 59879822 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05428 - - gmx:100789355 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05428 1 59878308 59879822 Trre1g05428 1 59878308 59879822 ECH