Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05416 ATGTTCAAGTCATGGAGCAAGAAAAACAAGATCAAAGCTGTATTCAAATTGCAATTTCAAGCAACTCAGGTTCCAAAGATGAAAAAATCTGCATTGATGGTATCTTTGGTGCCAGATGATGTTGGGAAACCAACAGTGAAACTAGAGAAAACTGCTGTACTAGATGGGACTTGTTTATGGGAGAATCCGATTTTCGAATCGGTTAAACTTGTTAGGGATTTAAAATCAGGAATTCTCCATGAGAAAATCTACCATTTCATTGTTGCAACTGGTTCTTCAAAATCTGGCTATTTGGGAGAAGCTTCAATTGATTTTGCTGATTTTTTAACAGAAACTGAACCAATTACTATTTCTCTTCCCTTGAAGTTTGCCAATTCCGGCGTAGTTTTACATGTAACTATTCAGAATGTGGAAGGATATACTGCTGAAAGAAATGGGGAAGATAATGGAGCTGAAGGAATTTATGATGATGGAAGCTTGAAACACCAATTGAGCTATGGCAGTACAGATGAAAGCTACAATCTTGAAGAAAACGGGAACTTGGCGAAGAGTAGATCGGAGTATTCTGAACATAATGCATCTAATGGCATCAGTCCTGGGGTAGCTTCATGGGATGACCCTTATAGCTTCAGACAGAACTCAATGCCTCCGAGAGGCACAGTTGAAGCCAATGCAACTCAAAACCAAGTGCATAAGAGGTCAAATACAGGCTGGTCCGTGGGTTCAGCATCGGATGGAAGTTTAGGTGACTGGACAAACAGTCCAAAAGAAAGATTACAAGAGCCTTCAAGCAATGGCACTGAAAATCTCAAAAGCGAAATTGTTTCTCTGAAGAGGCAGGCTGAAATATCGGAACTAGAGTTACAAGCGCTTCGGAAGCAGGTAGAAAAAGAAAGCATCCGGGGACAGAATTTATCGAGACAAATCAACGGTCTCAGAGATGAGAGAGATTCGTTCAAAACTAAATATGAGCAACTCAAGTCTCAACAGAACTTCAATACTAATAGTAATGAGACCAAAACCTCTAAAAACTTGAAGTCTGATATTGATAATATCAGGATTCAGTTAGAGGCAATGAAGGAAGAGCTTGTTTATGAAAAAGAAACGAGTGCCAATCTTCAATTGCAGCTGCAGAAAACACATAACTCGAACTCTGAACTTCTTTCGGCTATCACAGACCTTGAAGCAATGTTAGAACAAAAGAATAAAGAAATATGTGATCTATCTTCCAAAGAGCATGTGGATGACACAGTATTAGATCTTTTGCAGCAGAAGATTTCTGAGCAGAATAGCGAAATAGAGAAATGCAATAAGCAACGTGAGGAGCTAAGCGAGCTTATAAAGGAGCTCACTGTGGAGTATGATCTTCTTAAGAATGAAAATGCGGATATCTCTTTGAGATTAAAGGAAGATGAAGCAGAACACATCATGTTGCAGAATGAACACTCAGCTTCTTTAGTTACAATACAACAACTTGAGTCCCAAGTGAAGAGACTAGAAGCAAAGATAGAGATGCAGGAAGATGAATTTTCATCATCTTCGATCTCCATCAAGGAACTAGAAAATCAAGTTAAGTCTTTGGAGAAAGAACTGAAATTACAGGCAGATAAATTCGAAGATGATCTCCATGCAATGCAAAGTGCAAAATCGGAGCAGGAAGAACGGGCCATTCAAGCAGAAGAGTCATTGAGAAAGACGAGGCATAATAATGCTATCGCATCTGAGCGTCTTCAGGAGGAATATAAATCACTTTCTGTTGAAATGTCACGCAAAGTTGAAGAGAATGAAAAGATGATCTTGAAAGCAGCTGCAGAAGCTGATGAATTGCGGGACCACAACAGACTTATGGAAGAAATGCTCCAGAAATGCAATCAAGAGCTCAGGCTTATATCAGATCAACATGAAGCGAAAGCGGAAGAGCTCTTGAAACAAATAAGTACAAAAGAAAAAACAATTGAACAGATGTCGCGAGAACTAGAAGCGAAGTCTAAAGAACTTGAGGATGCACAGAGGCACAGGGATGAAAAGGATGCTACATTTTCAAAGCAAATCCAAATGCTTGAGATCCAACACAATGAAATTAAACACAGTTTGAAGAAAGAACAAGTGGACAAAGAAAATATGAAGAAACATGTATCTCAGTTAGAAGGAGAGCTTAAGAAAAAAGAAGCAGAATTAAGTGCTATGGAAAAGAAGCTCAAGAATAACAAAGGGCGAGGTAATTTGACCTCAAGAGACAGTGAGGCTTCTAAGGCAAATGTTAAGAAGTCAAAATCAGAAATGCATAAGGGAATGGATGCTGCAAGCACTGCTATTAGCAAGTCTGGAGGAAGTGATGGTGAACGCCTTACAAAGGAATTATTGAATGAAGTCGCAGTCCTAAAGGAAAGGAATACCAATATGGAAACTGAACTGAAGGAGATGGAAGAAAGATATTCAGAGATTAGTCTGAAATTTGCAGAGGTAGAGGGAGAAAGACAACAACTTGTTATGACCGTACGGAATCTCAAGAATGGTAAGAAGAACTAG 2529 0.3907 MFKSWSKKNKIKAVFKLQFQATQVPKMKKSALMVSLVPDDVGKPTVKLEKTAVLDGTCLWENPIFESVKLVRDLKSGILHEKIYHFIVATGSSKSGYLGEASIDFADFLTETEPITISLPLKFANSGVVLHVTIQNVEGYTAERNGEDNGAEGIYDDGSLKHQLSYGSTDESYNLEENGNLAKSRSEYSEHNASNGISPGVASWDDPYSFRQNSMPPRGTVEANATQNQVHKRSNTGWSVGSASDGSLGDWTNSPKERLQEPSSNGTENLKSEIVSLKRQAEISELELQALRKQVEKESIRGQNLSRQINGLRDERDSFKTKYEQLKSQQNFNTNSNETKTSKNLKSDIDNIRIQLEAMKEELVYEKETSANLQLQLQKTHNSNSELLSAITDLEAMLEQKNKEICDLSSKEHVDDTVLDLLQQKISEQNSEIEKCNKQREELSELIKELTVEYDLLKNENADISLRLKEDEAEHIMLQNEHSASLVTIQQLESQVKRLEAKIEMQEDEFSSSSISIKELENQVKSLEKELKLQADKFEDDLHAMQSAKSEQEERAIQAEESLRKTRHNNAIASERLQEEYKSLSVEMSRKVEENEKMILKAAAEADELRDHNRLMEEMLQKCNQELRLISDQHEAKAEELLKQISTKEKTIEQMSRELEAKSKELEDAQRHRDEKDATFSKQIQMLEIQHNEIKHSLKKEQVDKENMKKHVSQLEGELKKKEAELSAMEKKLKNNKGRGNLTSRDSEASKANVKKSKSEMHKGMDAASTAISKSGGSDGERLTKELLNEVAVLKERNTNMETELKEMEERYSEISLKFAEVEGERQQLVMTVRNLKNGKKN 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05416 842 Coils Coil 342 369 - -
Trre1g05416 842 Coils Coil 574 679 - -
Trre1g05416 842 MobiDBLite consensus disorder prediction 749 763 - -
Trre1g05416 842 Coils Coil 698 739 - -
Trre1g05416 842 MobiDBLite consensus disorder prediction 548 569 - -
Trre1g05416 842 MobiDBLite consensus disorder prediction 179 199 - -
Trre1g05416 842 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 135 IPR019448 -
Trre1g05416 842 MobiDBLite consensus disorder prediction 207 269 - -
Trre1g05416 842 Coils Coil 419 474 - -
Trre1g05416 842 Coils Coil 267 329 - -
Trre1g05416 842 Coils Coil 482 569 - -
Trre1g05416 842 Coils Coil 784 825 - -
Trre1g05416 842 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Trre1g05416 842 Coils Coil 384 404 - -
Trre1g05416 842 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 780 842 - -
Trre1g05416 842 MobiDBLite consensus disorder prediction 731 781 - -
Trre1g05416 842 MobiDBLite consensus disorder prediction 179 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05416 Trre-Chr1 59770672 59774607 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05416 - - gmx:100782613 1193.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05416 1 59770672 59774607 Trre1g05416 1 59770672 59774607 ECH