Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05414 ATGGATTCAAAAGTTGTTGATAGTCATGTGCAAGATGTGAATGATGAACAAAACTCACAAAACATTGAACCATATCCAGTGACACTGACACATGGACCAGAAGAGCCTTCTGAGCCTGAGAAGAAATCTGTTATGAGTAGGGTGAAGGCAAAGGCTAGGAAAGTAAGGGACAGTATTAAGAAGCAAGGTCAAAAAGTACTTGATCCTGGTAATGGAAATAGCAATGAAATTCAGCATACTCCTGAATCTGATGATGAAGGTGACTTGGATGAGGAAGATAAAGAAGTTGTTCAAGATCCACAAGTTCATCAAGTACCAAGTGAAAAACCTTATAATCCACTAGTTGGAGGTGCTTCCTTAACCACTGCAATCAATCAAAAAAATGCCACTGACAAGGCTGCAGAAGAGAAGCAAGAGCAATCTGAGGCCAATTTAGAGAGGTCAATAGTTTTGGAAGAAGAAGATTCTCGAGGGAAGCAAATAAGTAGACCTGAGGCATATACTCTTCCCAATTATCAAACCAAAGACACTGATCCAAGTGGGGAAGTTTATGACAATGAAGATGTTAAAATTGCTACACCTACACCTGAATATGAGAAAGTTGAAAATTTAGGAAATTCAGGAATTGATATTGAAGGTACAAAAGTTAAGGGAGAAGAACCATATCATGATACACAAGTTGAAGATGATTCTTCAACCACTGAAATCAATCAAAACATAGCCAATGATCAGGCCAAAACATTTCCTGGAGAAGAGAAGCCAGAGCAATACAAGATCAATTTGGATAATCCAGTAATAGTCTCGGAGGAATATCCTGTAAAACAAGGAACTAGAACTGAGGAGTATACTCTTCCCAATTATCAAATCAATCATACTGCTCCAAGTGATGCAGAAAATGATGAACTAAATGTACATGATGATGAACAAAAACCTACCACAGACACAAAAACCCAGCCATCGGTTGCTGACACCGAATACCCTCCTGCTGCTGGAAGCCATGATCGGTCTGTGCCACACTTCTCTGATGCAACGACAACTGAGAATGAATATCCTAAGGAAACAGGATCCACACATATCATTAGAAACGATGATATTTTGGAGGAAGATTCTCAAGATCAAGGAACTACTAAGGAATACACTCTTCCCAATTATCAAACCAAAGACACTGATGGAAGTGGTCCAGAAAGTAATAAATTAAAAGACATTACACCACCACTTGAAGAATCTCTTGAGAGATTGAATGTGCATGACGATGAACCAAAACCTTTCACAGAACAAAAAATCCAGCCATCTGCTGCTGCGGACATTGAATACCCTCCTGCTGCTGCTGCTGGAAGCCATGATAAGTTTGTGTCACACCTCTCTGATGTAACAGAAACTCAGAATGAACATCCTCAAGAAACAGTATCCACAGATATCAATAGAAACCATGAAATTCCCTCAGAGACTGAAGAAACTTTCAACACCATCACAAACACTGTTGAAAATCAACCAGATTATGAAGAATCAGTGGAGACACAACCAAAACACAAAAGTTACATAGATGAAACTGAAATCTCTTCTGCAACAACAGCTGATAAAACTCTTCTCCCTGAAAGCGATGGAGCTTATAATCTCGGTAATGATGGAACTAGCATTGGTAGTAATGACGGAACTGAAACAAAAAATGGTGACAAAGGGGCTACTGTGAATCACTATAAGGCACTTGCTGAAGTGATTTCAGAAGATTTACATAAAGGGAAAGAAGAGCCATCGGAAAAAGAGGATGGAAAATTGGATACTGAGGTTGAGAAGCCAGAGAAAGTGTTGTTTGAAGAGAGCAATGTGGATAGTCCAGGAAAAGGTATGGTTGGCAGGGTTAAGGATTACTATGGATCTTGGTTTGCTAAACCTGAGGAGAATCAATCACCACAAGGTGCAGGAATCAGTACTGAAGACTTATCAAAGACTAAAGATTCTGTTGCAGAAGTGAAACAAGTTGACAAAGTTGTGGATTAA 1998 0.3929 MDSKVVDSHVQDVNDEQNSQNIEPYPVTLTHGPEEPSEPEKKSVMSRVKAKARKVRDSIKKQGQKVLDPGNGNSNEIQHTPESDDEGDLDEEDKEVVQDPQVHQVPSEKPYNPLVGGASLTTAINQKNATDKAAEEKQEQSEANLERSIVLEEEDSRGKQISRPEAYTLPNYQTKDTDPSGEVYDNEDVKIATPTPEYEKVENLGNSGIDIEGTKVKGEEPYHDTQVEDDSSTTEINQNIANDQAKTFPGEEKPEQYKINLDNPVIVSEEYPVKQGTRTEEYTLPNYQINHTAPSDAENDELNVHDDEQKPTTDTKTQPSVADTEYPPAAGSHDRSVPHFSDATTTENEYPKETGSTHIIRNDDILEEDSQDQGTTKEYTLPNYQTKDTDGSGPESNKLKDITPPLEESLERLNVHDDEPKPFTEQKIQPSAAADIEYPPAAAAGSHDKFVSHLSDVTETQNEHPQETVSTDINRNHEIPSETEETFNTITNTVENQPDYEESVETQPKHKSYIDETEISSATTADKTLLPESDGAYNLGNDGTSIGSNDGTETKNGDKGATVNHYKALAEVISEDLHKGKEEPSEKEDGKLDTEVEKPEKVLFEESNVDSPGKGMVGRVKDYYGSWFAKPEENQSPQGAGISTEDLSKTKDSVAEVKQVDKVVD 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05414 665 MobiDBLite consensus disorder prediction 629 653 - -
Trre1g05414 665 MobiDBLite consensus disorder prediction 34 63 - -
Trre1g05414 665 MobiDBLite consensus disorder prediction 130 161 - -
Trre1g05414 665 MobiDBLite consensus disorder prediction 483 501 - -
Trre1g05414 665 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 363 646 IPR037491 GO:0009737
Trre1g05414 665 MobiDBLite consensus disorder prediction 571 607 - -
Trre1g05414 665 MobiDBLite consensus disorder prediction 354 374 - -
Trre1g05414 665 MobiDBLite consensus disorder prediction 298 313 - -
Trre1g05414 665 MobiDBLite consensus disorder prediction 338 353 - -
Trre1g05414 665 MobiDBLite consensus disorder prediction 1 405 - -
Trre1g05414 665 MobiDBLite consensus disorder prediction 502 516 - -
Trre1g05414 665 MobiDBLite consensus disorder prediction 279 297 - -
Trre1g05414 665 MobiDBLite consensus disorder prediction 457 616 - -
Trre1g05414 665 MobiDBLite consensus disorder prediction 538 559 - -
Trre1g05414 665 MobiDBLite consensus disorder prediction 631 648 - -
Trre1g05414 665 MobiDBLite consensus disorder prediction 213 230 - -
Trre1g05414 665 MobiDBLite consensus disorder prediction 457 476 - -
Trre1g05414 665 MobiDBLite consensus disorder prediction 375 392 - -
Trre1g05414 665 Coils Coil 126 146 - -
Trre1g05414 665 MobiDBLite consensus disorder prediction 12 26 - -
Trre1g05414 665 MobiDBLite consensus disorder prediction 231 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05414 Trre-Chr1 59760898 59764073 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05414 - - tpra:123902669 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05414 1 59760898 59764073 Trre1g05414 1 59760898 59764073 ECH