Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05397 ATGGCCTCTAAATTTTTCTTAAGCAGATTGGTTATACTCACCCTTGCATTTTCTCTAGCCCTGCCAGGCACTCTTGGAGGGATAGAATGTGAGAATCTAAACGAGGAAACATGTTCATTTGCTATTTCATCTAACAGCAAAAGGTGTGTACTTGAAAAACGTGTGAAAAGAACAGGGGAAGAAGCATACACATGCAAAACATCAGAGATAGAAGCTGATAAACTAAAAGATCACATCGAAAGCAACCAATGCATAAAAGCTTGTGACTTAGACAGAAAAACACTTGGAATTTCATCAGACTCACTTCTCGAATCTCGCTTCACAGAGAAACTATGTTCCCCACAGTGCTACATGAGTTGTCCAAATATTGTTGATCTTTACTTCAATCTTGCAGCTGGTGAAGGTGTGTTTCTTCCTAAGTTGTGTGAGGTGGGTGGTGTAAATGCTCGCCGTGGAATGGCTGAATTGAAAAGCTCTGGTATTGTGGCACCAGGGCCTGTGTATCCACCAGTGGAGTTTATAGCTTCACCTCCACAACCATGTAACACTGGGGATGTACCGGTGGCTGCCCCATACTACCCACCATACTAA 591 0.4281 MASKFFLSRLVILTLAFSLALPGTLGGIECENLNEETCSFAISSNSKRCVLEKRVKRTGEEAYTCKTSEIEADKLKDHIESNQCIKACDLDRKTLGISSDSLLESRFTEKLCSPQCYMSCPNIVDLYFNLAAGEGVFLPKLCEVGGVNARRGMAELKSSGIVAPGPVYPPVEFIASPPQPCNTGDVPVAAPYYPPY 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05397 196 PANTHER PAR1 PROTEIN 9 169 IPR009489 -
Trre1g05397 196 Pfam PAR1 protein 28 168 IPR009489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05397 Trre-Chr1 59650099 59651356 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05397 - - gmx:100787709 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05397 1 59650099 59651356 Trre1g05397 1 59650099 59651356 ECH