Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05387 ATGCATAACCAACACACATTCATGCGTTTGCGCACACTTCCCTCTCCATTTCTCATCAACCATCACGGCACTAAGCCAAATCTCTTCACAAGACCCAATTGGTTTCTCTCCATTCCCAAACCAATGCTTTGCTCTTCCTTCACTTCTTCTCACTCTGCTGGCGTTGTTGACGATGACGACGGAAACAACAACAACAACACCAATGGTACTGCTTCTTTCCGCAATTTCAAGCTCAATCAGTCCACTTTTTTGGCTTCTCTTATGCCCAAAACAGAAATTGGCGTCGATCGTTTCCTCCATTCTTATCCACACTATGATGGACGTGGTGTTCTCATCGCTATTTTCGATTCTGGTGTAGACCCAGCTGCTGCCGGATTACAAGTTACCTCAGATGGGAAACCAAAAATTCTTGATGTCCTTGATTGCACTGGGAGTGGAGATATTGATACGTCAAAAGTGGTGAAGGCTGATGCTGATGGTTGTATTTCTGGGGCATCAGGTGCATCTTTGGCTATCAATACTTCATGGAAAAACCCTTCTGGTGAATGGCATGTGGGTTATAAATTGGTTTACGAGCTTTTTACAGAAACGTTGACCTCTCGTTTGAAGAAAGAAAGAAAGAAAAAGTGGGATGAGATAAACCAGGAGGAAATTGCCAAGACTCTAAAACAACTTAATGATTTTGATCAGCAACACCGCAAGGTGGATGATGCTAAACTCAAAAAGGCTCGTGAAGATCTCCAGAATAGAATTGATTTTCTTAAAAAGCAATCTGAGGGCTATAATGATAAAGGGCCTGCCATAGATGCTGTTGTCTGGTATGATGGAGAGGTTTGGAGGGTTGCTCTTGATACACAGAGTCTTGAGGATGATTCAGATTGTGGGAAGCTTGCTAACTTTGTACCCTTAACTAATTATAGGACCGAGAGGAAATATGGTGTCTTCAGCAAATTAGATGCTTGTACATTTGTAGCGAATGTCTATAATGAAGGGAATGTCTTAAGTATTGTAACAGACTGCTCTCCTCATGGCACCCATGTTGCTGGTATAGCTACTGCATTCCACCCAGAGGAGCCTTTGTTGAACGGAGTTGCGCCCGGAGCACAATTAATATCTTGTAAAATTGGAGACTCTCGTTTAGGTTCATTGGAAACTGGAACTGGTTTGACTCGGGCACTGATAGCTGCCGTGGAGCATAAATGTGACCTTATAAATATGAGTTATGGGGAGCCAACATTGTTGCCAGACTATGGACGCTTTGTTGACCTTGTGAATGAAGTGGTGAACAAGCACCGTCTGATATTTGTAAGCAGTGCTGGTAATAGTGGGCCAGCGCTAAGCACTGTTGGTGCACCTGGTGGTACCTCTTCAAGTATCATAGGAGTTGGCGCTTATGTTTCTCCTGCTATGGCGGCTGGTGCTCATTGTGTTGTTGAACCTCCATCTGAGGGGCTTGAATACACATGGTCTAGCCGAGGACCAACGACTGACGGAGATCTTGGTGTCTCTGTAAGTGCTCCTGGTGGTGCTATCGCTCCTGTTCCTACATGGACCCTTCAACGGCGCATGCTCATGAACGGCACATCAATGTCATCTCCATCAGCTTGTGGGGGAATTGCGTTGCTCTTAAGTGCAATGAAGGCTGAGGGAACTCCTGTGAGTCCATATAGTGTGAGGAAGGCCCTGGAGAATACAACTGTTCCAATTGGTGATTCACCGGAGGATAAATTATCTACTGGGCAAGGGCTTATCCAAGTTGACAAGTGTTATGAATATATACAGCAGTCTCAAAATATTCCATGTGTTTGGTATCAAATAAACATCAAGCAGTCTGGAAAAACAAATCCTTCATCACGGGGCATCTACCTCAGAGAGGCTAATGCTTGCCGACAATCAACTGAGTGGACAGTGCAAGTTGATCCTAAATTTCATGAAGACGCCGACAACTTTAAAGATTTGGTTGTATTTGAGGAGTGTATTGAGTTACACTCTTCAGATAAAACAGTTGTGAAAGCTCCCGAGTATCTACTGCTCACTCATAACGGTCGTACATTCAACATATTAGTGGATCCTTCCAATTTATGTGATGGTCTGCATTATTATGAGGTCTACGGTATTGACTCTAAAGCACCTTGGCGTGGTCCTCTTTTCAGAATTCCAATTACTATAACCAAGCCCGTGGCAGTAATTAATAGAACTCCACAAGTTTCGTTTTCAGAGATGTTATTCCAGCCAGGCCATATAGAAAGGAAATATATAGAAGTGCCACATGGTGCATCTTGGGTTGAAGCAACCATGAACATATCAAGTTTTGATACACCTCGAAGATTTTTTGTTGATACAGTTCAGATACGTCCATTACAAAGCCCTTTGAAATGGAGGAGTGTTGTAACTTTTTCTTCTCCTGCTGCTAAAAACTTCACCTTTAGGGTAGTAGGTGGTCAGACATTGGAACTAGTCATAGCTCAGTTTTGGTCAAGTGGAATAGGGAGTCATGAGACTGCCAATGTGGATCTTAAGATTGTATTTCATGGTATAAAAGCTAGTCAAGAGGAAATTGTACTTGATGGTAGTGAAGCACCTGTCAGAGTTGATGCTGAAGCACTACTAGCATCTGAGAAACTTACACCTGTAGCAAATCTAAAAAAGATAAGAGTCCCATATCGACCTGTAGATGCTAAGATTAGTGCACTTTCAAATGATCGTGACAGACTCCCCTCTGGAAAGCAGATGCTAGCACTGACATTAACATACAAGGTCAAATTGGATGATGGAGCTGAAATAAAACCTCGAATACCATTTCTAAATGGTCGGATATATGATACTAAATTTGAGTCTCAGTTTTATATGATTTCCGATTCAAATAAGCGAGTTTATTCAAGTGGAGACGCCTATCCAACCTCTACAAAACTCCCCAAAGGAGAATACAATTTACAGCTATATATAAGGCATGAAAACTTGCAGATTTTGGAAAAGATGAAGCATCTGGTGTTATTCATTGAGCGAAATTTAGAAGAGAAGGACATCATTCGGTTGAGCTTTTTTTCTCAGCCAGATGGCCCACTAATGGGAAATGGTTCCTTTAAGTCCTCAACATTAATTCCAGGTATAAAAGAAGGATTTTATCTTGGTCCACCACCGAAAGACAAGCTTCCCAAGAACTCTTTACAAGGATCGGTATTGGTCGGATCAATATCATATGGACAACTATCATTTTCCGGACAAGGGGATCATAAAAATCCTAAGAAGCACCCTGCATCATATCGGATTTCTTATATAGTTCCCCCAAATAAGATTGATGAAGAGGACAAGGGAAAAAATTCTTCTTTATCATCCAAGAAGACCGTTTCTGAACGTTTAGAAGAAGAGGTGCGAGATACAAAAATAAAAGTGCTTGGAGGCATAAAACAAGAAAGCGATGAAGATCGCTTAGAATGGAACAAATTGGCTGCCTTGCTCAAGTTGGAATATCCAAAGTACACTTTGTTGCTCACAAAGATTTTGGAAGGCTTGGTTTCTAGGAGTAATATCAAAGACAAATTTCATCATAATGAAGAGATAATTAATGCAGCAAATGATGTGATCGACAGTATTGATAGAGAAGAATTAGCAAAAATTTTGGCACTGAAAATTGATCAGGGCGATGAGGAAGCAGAGAAAACCAAGAAAAAGATGGAATCGACCCGGGACCAGTTAGCAGAGGCACTTTACCAGAAGGGGCTTGCACTGGCAGAAGTTGAGTCTTTAAAGGAGGTAGGTAACTCCCCGGCTTCGGCTGCAACTGCAACAGAAGGTGCAGAACCCGACGAACAATCAAAGGATGATGGCATTCATCCAGATTTGTTTGACGAGAACTTTAAGGAACTGAAGAAATGGGTTGATGTTAAGTGCACAAAGTATGGGATCCTGTTGGTGACACACGAGAGGCGTAGTCAAAGGCTTGGGACAGCATTGAAGGTACTAACTGACATAATTCAAAATGATACTGAGCCTGCCAAGAAGAAACTGTATGAACTAAAGCTCTCTTTGCTTGAAGAAGTTGGATGGACTCATTTAGCTACATATGAGAGACAGTGGATGATTGCGCGTTTTCCCCCTAGCTTGCCCCTTTTCTAG 4116 0.4206 MHNQHTFMRLRTLPSPFLINHHGTKPNLFTRPNWFLSIPKPMLCSSFTSSHSAGVVDDDDGNNNNNTNGTASFRNFKLNQSTFLASLMPKTEIGVDRFLHSYPHYDGRGVLIAIFDSGVDPAAAGLQVTSDGKPKILDVLDCTGSGDIDTSKVVKADADGCISGASGASLAINTSWKNPSGEWHVGYKLVYELFTETLTSRLKKERKKKWDEINQEEIAKTLKQLNDFDQQHRKVDDAKLKKAREDLQNRIDFLKKQSEGYNDKGPAIDAVVWYDGEVWRVALDTQSLEDDSDCGKLANFVPLTNYRTERKYGVFSKLDACTFVANVYNEGNVLSIVTDCSPHGTHVAGIATAFHPEEPLLNGVAPGAQLISCKIGDSRLGSLETGTGLTRALIAAVEHKCDLINMSYGEPTLLPDYGRFVDLVNEVVNKHRLIFVSSAGNSGPALSTVGAPGGTSSSIIGVGAYVSPAMAAGAHCVVEPPSEGLEYTWSSRGPTTDGDLGVSVSAPGGAIAPVPTWTLQRRMLMNGTSMSSPSACGGIALLLSAMKAEGTPVSPYSVRKALENTTVPIGDSPEDKLSTGQGLIQVDKCYEYIQQSQNIPCVWYQINIKQSGKTNPSSRGIYLREANACRQSTEWTVQVDPKFHEDADNFKDLVVFEECIELHSSDKTVVKAPEYLLLTHNGRTFNILVDPSNLCDGLHYYEVYGIDSKAPWRGPLFRIPITITKPVAVINRTPQVSFSEMLFQPGHIERKYIEVPHGASWVEATMNISSFDTPRRFFVDTVQIRPLQSPLKWRSVVTFSSPAAKNFTFRVVGGQTLELVIAQFWSSGIGSHETANVDLKIVFHGIKASQEEIVLDGSEAPVRVDAEALLASEKLTPVANLKKIRVPYRPVDAKISALSNDRDRLPSGKQMLALTLTYKVKLDDGAEIKPRIPFLNGRIYDTKFESQFYMISDSNKRVYSSGDAYPTSTKLPKGEYNLQLYIRHENLQILEKMKHLVLFIERNLEEKDIIRLSFFSQPDGPLMGNGSFKSSTLIPGIKEGFYLGPPPKDKLPKNSLQGSVLVGSISYGQLSFSGQGDHKNPKKHPASYRISYIVPPNKIDEEDKGKNSSLSSKKTVSERLEEEVRDTKIKVLGGIKQESDEDRLEWNKLAALLKLEYPKYTLLLTKILEGLVSRSNIKDKFHHNEEIINAANDVIDSIDREELAKILALKIDQGDEEAEKTKKKMESTRDQLAEALYQKGLALAEVESLKEVGNSPASAATATEGAEPDEQSKDDGIHPDLFDENFKELKKWVDVKCTKYGILLVTHERRSQRLGTALKVLTDIIQNDTEPAKKKLYELKLSLLEEVGWTHLATYERQWMIARFPPSLPLF 1371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05387 1371 Gene3D - 1114 1371 IPR046939 -
Trre1g05387 1371 Coils Coil 237 264 - -
Trre1g05387 1371 Pfam Tripeptidyl peptidase II 870 1054 IPR022229 -
Trre1g05387 1371 SUPERFAMILY Subtilisin-like 88 600 IPR036852 GO:0004252|GO:0006508
Trre1g05387 1371 Gene3D - 603 737 IPR046940 -
Trre1g05387 1371 Pfam Subtilase family 107 569 IPR000209 GO:0006508|GO:0008236
Trre1g05387 1371 FunFam tripeptidyl-peptidase 2 isoform X1 90 175 - -
Trre1g05387 1371 ProSitePatterns Serine proteases, subtilase family, serine active site. 527 537 IPR023828 -
Trre1g05387 1371 Gene3D Peptidase S8/S53 domain 90 184 IPR036852 GO:0004252|GO:0006508
Trre1g05387 1371 Gene3D Peptidase S8/S53 domain 267 601 IPR036852 GO:0004252|GO:0006508
Trre1g05387 1371 PRINTS Subtilisin serine protease family (S8) signature 339 352 IPR015500 -
Trre1g05387 1371 PRINTS Subtilisin serine protease family (S8) signature 526 542 IPR015500 -
Trre1g05387 1371 PRINTS Subtilisin serine protease family (S8) signature 107 126 IPR015500 -
Trre1g05387 1371 FunFam Tripeptidyl-peptidase 2 603 734 - -
Trre1g05387 1371 PANTHER PEPTIDASE S8 83 988 - -
Trre1g05387 1371 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 87 569 IPR034051 GO:0006508|GO:0008240
Trre1g05387 1371 ProSiteProfiles Serine proteases, subtilase domain profile. 92 590 - -
Trre1g05387 1371 MobiDBLite consensus disorder prediction 1098 1117 - -
Trre1g05387 1371 Coils Coil 1211 1238 - -
Trre1g05387 1371 Gene3D - 205 263 - -
Trre1g05387 1371 ProSitePatterns Serine proteases, subtilase family, histidine active site. 343 353 IPR022398 -
Trre1g05387 1371 MobiDBLite consensus disorder prediction 1254 1278 - -
Trre1g05387 1371 FunFam Tripeptidyl-peptidase 2 homolog 267 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05387 Trre-Chr1 59554027 59572119 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05387 K01280 - gmx:100787184 2256.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05387 1 59554027 59572119 Trre1g05387 1 59554027 59572119 ECH