Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05382 ATGGAATCCCTTTGGAGACTTCTGTATTTGCTAGAGCCTGCGCCCTTTACACTAATCGCTACGGCTGTAGCTGTGACATTTGGATCAGCTTTTCGAGCTCTAAATTATGGGAAAGAAATGGAGCATAATCGGGATATGTCAGAAGCATCGATTACATTGGATAGGTCCCAAGCATTGATGATTCCAGTTATGAGCTCTTTTAGCTTGGTTCTGATGTTCTACTTGTTCTCATCAGTCTCGCAGTTTCTCACAGCATTCACTGCCATTGCTGCTGCATCGTCCCTTTTCTTCTGTCTGTCTCCTTATGCGGCTTATTTGAAGTCACATTTTGGTTTGGCTGATCCTTATGTTTCACGCTGTTGCTCAAAATCTTTTACACGAATCCAAGGAATACTATTGTTTACTTGCTCTTTTACAGTGGTTGCTTGGCTTGTTTCTGGCCATTGGATACTGAACAATCTGTTAGGCATATCTATATGCATTGCATTTGTAAGCCATGTGCGTCTTCCAAACATCAAGATTTGTGCAATGCTCCTCCTTTGTCTATTTGTATATGACATTTTCTGGGTTTTCTACTCTGAAAGATTTTTCGGGGCAAATGTCATGGTATCAGTGGCAACACAGCAAGCATCAAATCCTATGCACACAGTTGCTAGTAGTTTAAGTCTTCCTGGGTTGCAACTAATAACAAAGAAATTGGAGTTACCTGTAAAGATTGTCTTTCCAAGAAATTTGTTGGGCAGTGTTGTTCCAGGACAGAGTGCATCGGACTTCATGATGCTAGGTTTAGGGGACATGGCTATCCCAGGCATGTTCCTGGCTTTGGTCCTCTGCTTTGATTATCGCAAGAGCAGGGATACAATAAATCTCACGGAGTTATATTCTTCAAAGGGGCACAAATACATATGGTATGCACTGCCTGGATATGCCATTGGTCTGATAACTGCTTTGGCAGCTGGTGTCTTGACTCACTCACCTCAACCTGCACTCCTTTATCTGGTGCCTTCTACCTTGGGACCTGTAATTGTGATCTCTTGGATGAAAAATGAGTTACTTGAGTTGTGGGAAGGGAACATTCCAAATTTCAATGATAAGGACCGTGAAGTAGAAGTTTAG 1116 0.422 MESLWRLLYLLEPAPFTLIATAVAVTFGSAFRALNYGKEMEHNRDMSEASITLDRSQALMIPVMSSFSLVLMFYLFSSVSQFLTAFTAIAAASSLFFCLSPYAAYLKSHFGLADPYVSRCCSKSFTRIQGILLFTCSFTVVAWLVSGHWILNNLLGISICIAFVSHVRLPNIKICAMLLLCLFVYDIFWVFYSERFFGANVMVSVATQQASNPMHTVASSLSLPGLQLITKKLELPVKIVFPRNLLGSVVPGQSASDFMMLGLGDMAIPGMFLALVLCFDYRKSRDTINLTELYSSKGHKYIWYALPGYAIGLITALAAGVLTHSPQPALLYLVPSTLGPVIVISWMKNELLELWEGNIPNFNDKDREVEV 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05382 371 SMART psh_8 49 348 IPR006639 GO:0004190|GO:0016020
Trre1g05382 371 Pfam Signal peptide peptidase 49 358 IPR007369 GO:0004190|GO:0016020
Trre1g05382 371 PANTHER SIGNAL PEPTIDE PEPTIDASE 13 363 IPR007369 GO:0004190|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05382 Trre-Chr1 59522016 59524991 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05382 K09598 - gmx:100794976 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05382 1 59522016 59524991 Trre1g05382 1 59522016 59524991 ECH