Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05376 ATGGAACAATCCAAACTCAAATATCCAAATTCACCCTACTCAATTGAAGTTTCTGATTCTGACCATGTTTTTCATTCTGATAAAGTTCCTTACTTTGAAACAGTTTTGAGAGAAAAACAAGTGGAAGACATCAAAGAAAGAGTTGAGAAAGAACACAAAAATGTGTTGATGTTAAAGGTTTTTGAATCCTTCACTTCAATAAAGGATTCATTATCTAGAGTCAAAGAAGGGTTAGAGTTACAGGAAGAAAAAAATGAAACTTTTGATAAGGAAATGGTTTATATGGAACAAGAATTAGGTGATGAATCAAGGATGTTTTTGGAAGAAGCAAGGTTGATTTCAAGGCTTGCATTTGAGGTGGAAACAAAGGTTGAAAAATATAAGGAGTTAGTGAAAAAGGAGAAGAGAGAGTTGGAAATTAGTTTGATAAGTTTAACTGAGGAGAATAGGGATATTAATAACTTGCTTAGGGTTGCTTTGTTGGAGAAAGAAGCATTAGAGAAGAGAATTAAAGGACATGATCATAAAAGGAAGCCCCTTTTACAGTTTGCTGAATTTGGTTTGCAGAAAGTTGGATTTGGTTTCATGATGGGAGGTGGTAATAGTAATGAGCAATCAACAGATAGTGCTTCTGAGGGTAACAAATCAGATAGTAGTGATTATGAAGTGGAAGTTGTTAGTTTGGCCTCAACAGTGGAAAGGATAATGAAGAATCTACGTCTTGAAATCACTCAATTGAGAAGATCTTTGGAAGAATCTAGGTCAGACACAGAGCGCCTCCAATGTCTCGCAGAGAAACAAATCAAAGAAATCGAAGAAAATAAACTCTACATCAAGGAGTTAGAAGATAGAGAAAGAATCTTGACTCAAAAGGTAGATGAGTTTTTGATTGAAAGCAAAGAAGCAGAAGAAGAAGTAGCTAGATGGAAAGAAGCTTGTGAATTGGAAGTTAAAGCCGGAAAGAAAGAGATTGAAGAGCGCGACAAAATGGTGGCTGCATTGAAACAAGAACTACAAAAAACAAAGGGTGCTTTGGACATATCCAATGGAAAATTAAGACTTAAAGAAGAACTAGCAATGACTGCAATAGCAGCACAGGAAGCAGCAGAGAAGTCTTTGCAGTTAGTTGATAGTAGAGGAGTTGAACTTCGTCGGCGAATTGAGGAACTAACTAGACAACTTGAGGAAGCGGAGAAACGTGAACGTAATAGTCGTAAAGTGAGACGTATATGTTGGCCATGGCAAGTTTTTAGATTGAGTTCTAGCAATATTGCAGACTCTAGAAGGATGCTACCAGAAATGCAATCCTTTCTTCAATAA 1320 0.3644 MEQSKLKYPNSPYSIEVSDSDHVFHSDKVPYFETVLREKQVEDIKERVEKEHKNVLMLKVFESFTSIKDSLSRVKEGLELQEEKNETFDKEMVYMEQELGDESRMFLEEARLISRLAFEVETKVEKYKELVKKEKRELEISLISLTEENRDINNLLRVALLEKEALEKRIKGHDHKRKPLLQFAEFGLQKVGFGFMMGGGNSNEQSTDSASEGNKSDSSDYEVEVVSLASTVERIMKNLRLEITQLRRSLEESRSDTERLQCLAEKQIKEIEENKLYIKELEDRERILTQKVDEFLIESKEAEEEVARWKEACELEVKAGKKEIEERDKMVAALKQELQKTKGALDISNGKLRLKEELAMTAIAAQEAAEKSLQLVDSRGVELRRRIEELTRQLEEAEKRERNSRKVRRICWPWQVFRLSSSNIADSRRMLPEMQSFLQ 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05376 439 Coils Coil 380 407 - -
Trre1g05376 439 Coils Coil 117 169 - -
Trre1g05376 439 Coils Coil 229 256 - -
Trre1g05376 439 PANTHER OS08G0559800 PROTEIN 40 437 IPR040300 -
Trre1g05376 439 Coils Coil 78 98 - -
Trre1g05376 439 MobiDBLite consensus disorder prediction 199 218 - -
Trre1g05376 439 Coils Coil 264 312 - -
Trre1g05376 439 MobiDBLite consensus disorder prediction 197 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05376 Trre-Chr1 59480308 59482317 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05376 - - gmx:100787413 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05376 1 59480308 59482317 Trre1g05376 1 59480308 59482317 ECH