Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05366 ATGACACCATCACTGTCAATTTCTTCTTCTTCTTCTTCAACCATGTTGTTATATCCTAAACTAGGAACAACAACAACAACAACAACATGTGCAATGTCACTCTCCACTACTTCATATTCAAAATCCCAACAATTTTATATTTATTCATTGCGTCAACGCCTTTTCTCACCTTGGAATGGTTTGAAGAAACTGGGTTTCTTAACTAAACCCAAAAATCCAATCTTTCATATTATAGATAGAAAGGGTCGGTGTAAGAGTAAGGTTGTTTATGCTTCTCTTTTTGGAGTTGGAGCTCCTGAAGCTTTGGTAATTGGGGTTGTTGCTTTGTTGGTTTTTGGTCCTAAGGGTCTTGCTGAGGTTGCTAGAAATCTGGGAAAAACATTGCGTGAATTTCAACCCACCATTAGAGAGATCCAGGATGTTTCAAGGGAATTTAAGAGCACACTTGAACGGGAGATTGGTATTGATGACATTTCAAACCCATTACAGAACACATACTCTTCCAATGTACGAAACACCACGCCAACTCCATCTGCCACTGAAATTACCAATAATTCTCAGACCACTGTTGACCCTAACGGGAACGGAGATCCTAGTAGAGCATACAGTTCTGAGGATTATCTAAAGATTACAGAGGAGCAGTTAAAGGCAGCTGCTGCACAACAGCAGGTGCCGACGCCCCCTCCTCAAGAAGCCGAAATCGAGCAAGAAGTCCAGCCTCCTGCTAATGAAACAGCTGCTACTGTGCCACCACCTCCGAAGCCAGAAAGCGAATCGTTTCCTTCGGATTCATAG 795 0.4226 MTPSLSISSSSSSTMLLYPKLGTTTTTTTCAMSLSTTSYSKSQQFYIYSLRQRLFSPWNGLKKLGFLTKPKNPIFHIIDRKGRCKSKVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLREFQPTIREIQDVSREFKSTLEREIGIDDISNPLQNTYSSNVRNTTPTPSATEITNNSQTTVDPNGNGDPSRAYSSEDYLKITEEQLKAAAAQQQVPTPPPQEAEIEQEVQPPANETAATVPPPPKPESESFPSDS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05366 264 Gene3D - 93 142 - -
Trre1g05366 264 FunFam Sec-independent protein translocase protein TATB, chloroplastic 93 142 - -
Trre1g05366 264 Pfam mttA/Hcf106 family 96 146 IPR003369 GO:0015031
Trre1g05366 264 MobiDBLite consensus disorder prediction 215 264 - -
Trre1g05366 264 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC 26 258 - -
Trre1g05366 264 MobiDBLite consensus disorder prediction 160 202 - -
Trre1g05366 264 NCBIfam twin-arginine translocase TatA/TatE family subunit 95 140 IPR006312 GO:0016020|GO:0043953
Trre1g05366 264 MobiDBLite consensus disorder prediction 160 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05366 Trre-Chr1 59420463 59424208 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05366 - - tpra:123914133 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05366 1 59420463 59424208 Trre1g05366 1 59420463 59424208 ECH