Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05365 ATGGATTCGGTCGAAAAGAGGGACGAGGAAGATTGTGAGTTTACTGATAGGAGGAAGCAGAGGTCAAGGAAGAATGTGAACGGCGATGAAGGTGACGGTGATGTTGTAGGTGTAGGTGTAGGTGAAGGTTCTGATGGAAGTGGAAGAAGGAAGCGTTCTAGTAAAGGTGATGGTGATGATTATGATTCGCGGTCGAAGGCTGCGAAGAAGAGACAGGAGGAGAATACATTGGAGAAGTTGAGTAGTTTTTATGAGGATGGTGAGTTGGATGGTGGGGATAAGATGGGAAGGAATGCTCATAGAGGTAAAGAGGATTTTAGGTATTCGGAAAAGAGTGAAAGTGGAAGAGATTCGAGAGATAAGAGCCGTGGGTCTTCTGAACAGGTTAAGAGTTCTAGAAGGAAGTGGGATGAAGTTGATATTGTTAGTGTGAAGAAAGGGCAAGATAGTGTTTCTGAGAAAGGTGAGTTGAAGAGTGTTAAGGTTTCTGATGGTAAGAGGAGTGAGTCTAGGGAGAGGAGTGGATCTGCTAGGAATGAACATGCGGAGAGTAAAGTTTCTGGTAGTGATAACAAGGTTGTTAAGTCTGGTGGTAAAGATGATAGAAGAAGTGATTCTGAGAGAGGTAAGAGTAAAGGGAAGGTTGAAACGCCGGATGATAGGGTTGAGAAGCCTAGGCGTCATAGAACACCGACCGGTTTTGATGTGGCTGAAACTTTGGAGAAGCCGGGAAATGCAGATGAGGATAGCAATGTGCGGGTTAGGGATAAGAGTGTTAGAGAAACCGGGAACTCGACCAGATCTAGGACGCCTGAGAAGAGTGGAAAGCGCCATCAAGATTCAGAGAATTCGGAGATGGATCATGAAAGAAGTGGTAGTTTTAAAAGAAAGGAAATTGAGAGTGATGATTATAAAGATGATAGGTCCAAAGGAAAAGATGAAACTTGGAGTGATAGGAGGAAAGATCGGGAAAATTCTAAAGAGAATTGGAAAAGGAGGCAGCAGAGTAATAGTGACAGAGATTCAAAGAAGGAGGATGGTGCTTTTGATCACAACAGAGAGTGGGAGTTGCCTAGACACGGTTATGATAGGATGGACAACGAAAGGCCTCACGGTCGGTTAGGTGGTAGAAAAGATGGACTTAGGGGGGAAGCTGTCAAAACATCAACGAAGTTTGGAATTTCAAATGATAATTATGACGTGATAGAGATCCAGCCAAAGTTCGTTGATTATGGAAAAACAGATTCTGTATCTAACCTTAACAAGAGAACTGAAGGTAAATCTGGCAGTAATCATGAAGAATGGACACATCATCAGGAAGAAAGAGCGAGAAAGAGTGATTTATCTGGTTCTGGGACACCTAGTGAAGATCAGAAGGAGAGACATGCTGATGATGACTATGATTTTTACGGTGGAAGAGTAAGAGGTCAGAAAAGTGTCGCAAATACTCGTGGTACTGGTGGCTCACAGTCTCAATATGGCAACCCAGATTCTGGATCCTTTAACAGAGGTGGTCCACAAGGAATAAAAGGGAACAGGGTTGGTAGAGGAGGAAGGATTAGGCCTCCTGGAAGAGACAACCAGCAGGTTGGAATGCAATTGCCAATGATGGGATCACCTTATGGTCCTCTTGCCATGCCTCCACCTGGACCAATGCAGCCTCTTACCCATGGTATGTCACCTGGTCCTCCAATGTCCCCTGGAGTCTTCATGTCACCATTCAACCCATCTGTTTGGCCTGGACCTCGAGGTGTTGACATGAGTATAATGGGTGTTCCACCCGTAGGGTCTCCTGTGCCTCCAGGTCCAAGATTTAATGCGGCTAATATGGGGAACCCACCAAATCCTGCAATGTATTTTAACCAATCAGGCCATGGAAGGGGGATTCCCCCAAGCATTTCTAGTCCTGGTTTCAATCATACAGGACCGATGGGTAGAGGAACACCACCTGATAAAACTCCAGGGGGATGGGCTCCACCTAAAAGTGGAAGTATGGGTAAAGCTCCCTCCAGAGGTGAGCAGAATGATTATTCTCAAAACTTTGTTGACACTGGTATGCGGCCTCAGAATTTTATCAGGGAGCTTGAGCTGACGAATGTTGTAGAGGACTATCCTAAGCTTAGGGAGCTTATACAGAAAAAGGACGAGATTGTGGAAAAATCTGCATCCACTCCCATGTATTACAAGTGTAATCTGAAAGAGTTTGAACTAGCTCCAGAGTTCTTTGGGACCAAGTTTGATGTTATTCTCGTGGATCCTCCATGGGAGGAGTATGTGCACCGAGCGCCTGGTGTTGCTGAACACACGGAGTGCTGGACATTTGAAGAAATAATGAACCTCAAGATTGAGGCTATAGCCGATACTCCTTCTTTCATCTTCCTTTGGGTGGGTGATGGTGTAGGCCTTGAACAAGGCCGTCAATGTCTAAAGAAGTGGGGATTTCGTAGATGTGAAGATATATGTTGGGTGAAAACAAATAAAAGTACTGCAACTCCAGGACTGCGGCACGATTCACATACTTTATTTCAACATTCAAAGGAACACTGTTTGATGGGAATAAAAGGAACAGTTCGTCGAAGTACTGATGGCCATATTATTCATGCCAACATTGACACGGATGTAATTATTGCTGAAGAACCTCCTTATGGTTCAACACAAAAACCTGAAGATATGTATAGGATTATTGAACACTTTGCCCTTGGAAGGAGGAGACTTGAACTATTTGGTGAAGACCACAATATCCGAGCCGGCTGGCTGACTCTTGGTAAAGAATTGTCGTCTTCAAATTTTAATAAGGAGGCATATGTCAAGAACTTCGGTGACAAGGATGGAAAAGTTTGGCAGGGAGGCGGTGGAAGAAATCCACCTCCTGAGGCACCTCATCTGGTGGTGACTACTCCTGATATAGAGGCTCTTAGGCCAAAGTCCCCAATGAAGAACCAGCAACAAATGCAGCAGCAGCAATCAGTAACCATTTCTTTGACGTCAGGTAGCGGGTCAAACAGAAGGCCCACTGGGAATTCACCGCAGAATCCAACTGCACTCGGTCTCAACCAAGAAGCCTCTAGCTCAAACCCTTCTACACCAGCTCCATGGGCTTCTTCACCTATGGAGAGCTTTAAGGGACGTGAAGGCTCTGTATTGCCTTCAGATGATAAAGTTTTTGATATGTATGGTTTTAATGGACCACCAACACCATCTGGCTTTCTAGATTTTGAATCATACAGACAAATGAATATGTTGTAG 3246 0.4467 MDSVEKRDEEDCEFTDRRKQRSRKNVNGDEGDGDVVGVGVGEGSDGSGRRKRSSKGDGDDYDSRSKAAKKRQEENTLEKLSSFYEDGELDGGDKMGRNAHRGKEDFRYSEKSESGRDSRDKSRGSSEQVKSSRRKWDEVDIVSVKKGQDSVSEKGELKSVKVSDGKRSESRERSGSARNEHAESKVSGSDNKVVKSGGKDDRRSDSERGKSKGKVETPDDRVEKPRRHRTPTGFDVAETLEKPGNADEDSNVRVRDKSVRETGNSTRSRTPEKSGKRHQDSENSEMDHERSGSFKRKEIESDDYKDDRSKGKDETWSDRRKDRENSKENWKRRQQSNSDRDSKKEDGAFDHNREWELPRHGYDRMDNERPHGRLGGRKDGLRGEAVKTSTKFGISNDNYDVIEIQPKFVDYGKTDSVSNLNKRTEGKSGSNHEEWTHHQEERARKSDLSGSGTPSEDQKERHADDDYDFYGGRVRGQKSVANTRGTGGSQSQYGNPDSGSFNRGGPQGIKGNRVGRGGRIRPPGRDNQQVGMQLPMMGSPYGPLAMPPPGPMQPLTHGMSPGPPMSPGVFMSPFNPSVWPGPRGVDMSIMGVPPVGSPVPPGPRFNAANMGNPPNPAMYFNQSGHGRGIPPSISSPGFNHTGPMGRGTPPDKTPGGWAPPKSGSMGKAPSRGEQNDYSQNFVDTGMRPQNFIRELELTNVVEDYPKLRELIQKKDEIVEKSASTPMYYKCNLKEFELAPEFFGTKFDVILVDPPWEEYVHRAPGVAEHTECWTFEEIMNLKIEAIADTPSFIFLWVGDGVGLEQGRQCLKKWGFRRCEDICWVKTNKSTATPGLRHDSHTLFQHSKEHCLMGIKGTVRRSTDGHIIHANIDTDVIIAEEPPYGSTQKPEDMYRIIEHFALGRRRLELFGEDHNIRAGWLTLGKELSSSNFNKEAYVKNFGDKDGKVWQGGGGRNPPPEAPHLVVTTPDIEALRPKSPMKNQQQMQQQQSVTISLTSGSGSNRRPTGNSPQNPTALGLNQEASSSNPSTPAPWASSPMESFKGREGSVLPSDDKVFDMYGFNGPPTPSGFLDFESYRQMNML 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05365 1081 MobiDBLite consensus disorder prediction 454 472 - -
Trre1g05365 1081 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 742 894 IPR029063 -
Trre1g05365 1081 MobiDBLite consensus disorder prediction 45 384 - -
Trre1g05365 1081 ProSitePatterns N-6 Adenine-specific DNA methylases signature. 749 755 IPR002052 GO:0003676|GO:0008168|GO:0032259
Trre1g05365 1081 MobiDBLite consensus disorder prediction 1 384 - -
Trre1g05365 1081 PANTHER N6-ADENOSINE-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT 45 1043 IPR045123 -
Trre1g05365 1081 MobiDBLite consensus disorder prediction 479 502 - -
Trre1g05365 1081 MobiDBLite consensus disorder prediction 625 677 - -
Trre1g05365 1081 MobiDBLite consensus disorder prediction 976 1034 - -
Trre1g05365 1081 MobiDBLite consensus disorder prediction 409 531 - -
Trre1g05365 1081 ProSiteProfiles MT-A70-like family profile. 705 944 IPR007757 -
Trre1g05365 1081 Pfam MT-A70 746 924 IPR007757 -
Trre1g05365 1081 MobiDBLite consensus disorder prediction 426 447 - -
Trre1g05365 1081 MobiDBLite consensus disorder prediction 975 1053 - -
Trre1g05365 1081 ProSiteProfiles mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase-like (MT-A70-like) family profile. 525 1063 - -
Trre1g05365 1081 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05365 Trre-Chr1 59413699 59419336 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05365 K23960 - gmx:100798100 1608.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05365 1 59413699 59419336 Trre1g05365 1 59413699 59419336 ECH