Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05358 ATGGACTTAGAGTTGAATAGAAGTGTTTCTCCAACACTAAAGATTTTTCAAAATGGGATATGGTGGTTCATAGTGTTGATTAATCTTGGTTATATCATGATTTGGCTTATGATGCCTACAAATACCTTCTTTATGCATTGGTTACCTGATATTCAAGCCAAGGCAGATCCAATATACTTTGGAAAACAAGGAACAACCATACTGGTTTACACATTTCCCATAATTTTTATAGCAACTTTGGCATGTTTATACCATCATTTGATGCAAAAAGCTTCTAATCATAGCACTGAAAGCAAGATTGGATCCTTAAGAAAGGCATCATGGAGAAAACCATTGCTTGTAAATGGTCCTCTTGGGATTATCTCAAAGATAGAGTTCTCTTTCATAATCATGTTTGTTATACTATTAATTTGGTCCTTGTGTTCCTACTTACATGGCATGTTTGCAAAAGTGGCCCTACAAGCAGCTTATGAGAGAGAGCAAGTGTGGGAAGCCAAACTGAAAAATTCAGCACTGGCTTTAGGCTTTGTTGGGAACATTTGCTTAGCTTTTCTATTCTTTCCGGTTTCAAGAGGGTCGTCCATTTTGAGGTTCACTGGTCTAACTTCAGAAGCAAGTATCAAGTATCATATATGGCTAGGACATATTGCAATGACAATGTTCACAGCTCATGGACTAGGTTATGTTACATTTTGGGAGAAGACACATCATACCGCAGAGATATTCAAATGGAACAAAATTGGCATCTCAAATGTGGCAGGAGTAGTAGCTCTGCTTGCTGGATTAACCATGTGGACTACAACCTTACCTCTTATAAGGCGGAAATTTTTCGAGCTTTTCTTCTACATTCATCACTTATTCCTACAGTCCCAGCAGAAAATTCAGTTGGTTTCTGCTCGCGTTTTACCTTGTGAAGCTGTTGAGCTGAATTTCTCCAAGAATCCAGGATTGTGCTATGCTCCAACAAGTATAATTTTCATAAATATTGCTAGTATATCCAAGTTGCAATGGCACCCTTTTTCAATCACCTCATGCAGTAATACTGATTCTGATACCTTAAGCATTGTCATCAAAAGTACAGGAAAATGGTCCCAGACATTGTTCCAGAAACTATCAACTTTGTCTCCACCGGCCCACCTCGATGTCTCCATTGAAGGGCCATATGGACCAGCTTCAACTTTTTTCTCAAGACATGAAACGCTAGTGATGGTGAGTGGAGGAAGTGGTATTACTCCTTTCATCTCGATAATTCGTTCGCTACTCTTTAAGGCCAACATCGAAGGCGGAAAATCTCCCAAAGTTCTTCTTATATGTTCCTTCAAGAAGTCCATTGATCTTACAATGATAGACCTAATCCTTCCTGTCTCAGGCACCGCCCTTGACACATCACGCCTGCAGCTTCAAATTGAAGCCTATGTAACAAGAGAGAAACAGCCAGCAACGACGAATGATAGAAAGCTTCTTCAAACATTATGGTCCATTCTTAGCATAGTGTTTGTATGTGTATCTATAGTTATTGCAGCTACATCTGTCTTTCTCTGGAACAAAAAACAAAACAAGGCTTTGAGGCAGATTAAAAACACATCGACATCGACTCCAACAACTTCACCACGCTCGGTAAATCACAAAACCGATAGAGAATTAGAGAGTCTTCCCTTCCAATCCTTTATCCAAACAGCTAAAATTCATTACGGTGAAAGGCCTAATATAAAGAAAGTACTTTCTAACTGTGATGGATCAAGCATTGGAGTTCTTGTTAGTGGTCCAAGAAAAATGAGACATGAAGTAGCATCAATTTGTACATCTTGTTCAACAGATAACTTGCATTTTGAGTCTATTAGCTTCAGCTGGTGA 1854 0.3894 MDLELNRSVSPTLKIFQNGIWWFIVLINLGYIMIWLMMPTNTFFMHWLPDIQAKADPIYFGKQGTTILVYTFPIIFIATLACLYHHLMQKASNHSTESKIGSLRKASWRKPLLVNGPLGIISKIEFSFIIMFVILLIWSLCSYLHGMFAKVALQAAYEREQVWEAKLKNSALALGFVGNICLAFLFFPVSRGSSILRFTGLTSEASIKYHIWLGHIAMTMFTAHGLGYVTFWEKTHHTAEIFKWNKIGISNVAGVVALLAGLTMWTTTLPLIRRKFFELFFYIHHLFLQSQQKIQLVSARVLPCEAVELNFSKNPGLCYAPTSIIFINIASISKLQWHPFSITSCSNTDSDTLSIVIKSTGKWSQTLFQKLSTLSPPAHLDVSIEGPYGPASTFFSRHETLVMVSGGSGITPFISIIRSLLFKANIEGGKSPKVLLICSFKKSIDLTMIDLILPVSGTALDTSRLQLQIEAYVTREKQPATTNDRKLLQTLWSILSIVFVCVSIVIAATSVFLWNKKQNKALRQIKNTSTSTPTTSPRSVNHKTDRELESLPFQSFIQTAKIHYGERPNIKKVLSNCDGSSIGVLVSGPRKMRHEVASICTSCSTDNLHFESISFSW 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05358 617 Pfam Ferric reductase like transmembrane component 174 287 IPR013130 -
Trre1g05358 617 SUPERFAMILY Riboflavin synthase domain-like 294 390 IPR017938 -
Trre1g05358 617 CDD NOX_Duox_like_FAD_NADP 296 475 - -
Trre1g05358 617 SFLD Ferric reductase subgroup (FRE) 292 617 - -
Trre1g05358 617 Pfam FAD-binding domain 294 392 IPR013112 GO:0016491
Trre1g05358 617 SFLD Ferric Reductase Domain 292 617 - -
Trre1g05358 617 SFLD Ferric Reductase Domain 49 286 - -
Trre1g05358 617 PANTHER NADPH OXIDASE 287 615 - -
Trre1g05358 617 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 289 397 IPR017927 GO:0016491
Trre1g05358 617 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 382 602 IPR039261 -
Trre1g05358 617 Gene3D - 382 616 IPR039261 -
Trre1g05358 617 FunFam Ferric reduction oxidase 3 387 504 - -
Trre1g05358 617 Pfam Ferric reductase NAD binding domain 398 600 IPR013121 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05358 Trre-Chr1 59374209 59377866 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05358 14 617 Miscellaneous Gene Families AT1G01590 43.678 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05358 K00521 - fve:101307550 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05358 1 59374209 59377866 Trre1g05358 1 59374209 59377866 ECH