Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05336 ATGGCTTCTTCTTCTCCAATATTCATATCCACAGAGAATTTACGATCCATCCTCACCCATCAAACTCTAATCAATCATATCCAATTCAATCTCCCCAAAATCTCAACTTTTCTCCAAACCCCAATTCGCCAACACTACAATCTCTCTCCCTCATCTTCCCTTCTCCTCATGCCATCTTGGTCTTCTTCTCCTTCATACCCTTACATTGGTGTCAAACTCGTAACCCATTTCCCTCAAAATTCTTCAATCAATTTACCAGGTGTTCAAGGTAGCTATGTTCTTTTCAATTTAACAACTGGTCAAACTCTTGCTTCAATGGATTCAACTGAACTAACACTTTTCAGAACCTCTTGTGTTTCTGGTTTGGCTTCTAAATATTTATCTAGAGATGATAGTGAAGTTCTTGTTATGGTTGGTGCTGGTTCTCTTGCACCACATTTGATTAAAGCTCATTTTTCAGCTAGACCAAGTTTGAGAAAAGTTTTGATTTGGAATAGGACAGTTGAAAAGGCGGAAACTTTAGCGAAAAAATTGAGTGAAAGCGATGAATTTTCGCTTTCGGGGTTGAGTTTTGAAGGGGTTGGAAATTTGGATGAGGTTGTTGGATTTGGGGATATTGTGAGTTGTGCTACTAATTCTGAGACACCACTTGTGAAAGGTGAGAGGTTGAAGATTGGAGCTCATTTAGATTTGGTTGGTTCTTTTAAGCATTCAATGAAGGAATGTGATGATGAGGCTTTGAAAAGAGGGAAAGTTTTTGTTGACAATGAAGCTGCATTGGTTGAAGCAGGGGAGCTTGTTGGTGCTTTTGAAAGGGGAGTGATCAAGGAAGATGAAATCGGGGGAAATTTGGTGGAGCTTATTAGAGGTGATAAAGTTGGGAGAAGCAGTTTAGAAGAAATTACTGTTTTTAAGTCTGTTGGTTCTGCTGTTGTTGATATGCTTGCAGCACAGTTTGTTTATGAGACATACACAAGGAAATAG 984 0.3902 MASSSPIFISTENLRSILTHQTLINHIQFNLPKISTFLQTPIRQHYNLSPSSSLLLMPSWSSSPSYPYIGVKLVTHFPQNSSINLPGVQGSYVLFNLTTGQTLASMDSTELTLFRTSCVSGLASKYLSRDDSEVLVMVGAGSLAPHLIKAHFSARPSLRKVLIWNRTVEKAETLAKKLSESDEFSLSGLSFEGVGNLDEVVGFGDIVSCATNSETPLVKGERLKIGAHLDLVGSFKHSMKECDDEALKRGKVFVDNEAALVEAGELVGAFERGVIKEDEIGGNLVELIRGDKVGRSSLEEITVFKSVGSAVVDMLAAQFVYETYTRK 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05336 327 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 325 IPR036291 -
Trre1g05336 327 Gene3D ornithine cyclodeaminase, domain 1 38 321 IPR023401 -
Trre1g05336 327 Pfam Ornithine cyclodeaminase/mu-crystallin family 21 325 IPR003462 -
Trre1g05336 327 FunFam Ornithine cyclodeaminase 129 308 - -
Trre1g05336 327 PANTHER KETIMINE REDUCTASE MU-CRYSTALLIN 7 326 IPR003462 -
Trre1g05336 327 PIRSF CryM 1 327 IPR003462 -
Trre1g05336 327 Gene3D - 129 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05336 Trre-Chr1 59213899 59214882 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05336 - - mtr:11419735 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05336 1 59213899 59214882 Trre1g05336 1 59213899 59214882 ECH