Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05323 ATGTCAACCCCATTCGAGAGGTACCAAAAACTTGCCTTAATAGAGTCTCTATCAAAAATTTACAGATACCCAATTGCTTGTAAAGAGCTAAGCTTTATTCTCAGAGAAGCTTTTCATCAATTCCCAAAGAATTTACAAACCCTAATCTTCCAAGATACTCTCTTTGCCTTCCGTCTCATTCCACAAATGCAGACTCAGAATGCTGTTTCAGCAGTCCATTTACTCCTTCAGAGTGTTGAAGCGGCGCTGCATAAACAGAAAAAGAATATGGCTGTAACTGAATTTAAGCATGCAATGGTTGCTCATAAGAGGCGTTCTAAAGCTCAACACCAGGTAGAAAAAGGTTCATTGCAACTACCACAAGATGTTCTTGTACACATTTTCAGTTTTCTAGATATGCATTCTTTGGTCTCGGCAGGGATAGTCAGCTGGTCATGGAACATGGCTGCAAATGATAACCATCTGTGGGAGTTGCAGTATGTTGTACTGTATGACGGTGCTGCTAAACAGCACCCTGTGAGACCCGACGAAGACATGAATGATAAGCTTTTACAGAAACACCTGGATACTAGAATAGGTGTTAACTGGAAAGAGGCTGTTAAAGGAGCATACACTGGATCACTATCCAAGAAATTAACAACCAATCGAGGTTACTGCAAACACTGCAAAGCTATAGTTTGGTTAAACAACTCAAAATGCCCTAATTTACATGGAGGAATAATATCTAAAATTTATGATGTCAAACCTGTAACATCATTCCAGGTTGTGGAATATCTTCTAGATGATTCACTATCCGTAGCATCTTCCTCGGACAGTGACAGTGATAGTGATTCAGAAGGAGAGTCAGTATCTTCTAGGTTATGGGCATATCCCAAGCATTTAAGAAAATACTAG 894 0.3971 MSTPFERYQKLALIESLSKIYRYPIACKELSFILREAFHQFPKNLQTLIFQDTLFAFRLIPQMQTQNAVSAVHLLLQSVEAALHKQKKNMAVTEFKHAMVAHKRRSKAQHQVEKGSLQLPQDVLVHIFSFLDMHSLVSAGIVSWSWNMAANDNHLWELQYVVLYDGAAKQHPVRPDEDMNDKLLQKHLDTRIGVNWKEAVKGAYTGSLSKKLTTNRGYCKHCKAIVWLNNSKCPNLHGGIISKIYDVKPVTSFQVVEYLLDDSLSVASSSDSDSDSDSEGESVSSRLWAYPKHLRKY 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05323 297 ProSiteProfiles F-box domain profile. 113 159 IPR001810 GO:0005515
Trre1g05323 297 SMART fbox_2 119 159 IPR001810 GO:0005515
Trre1g05323 297 PANTHER OS05G0526300 PROTEIN 1 295 - -
Trre1g05323 297 SUPERFAMILY F-box domain 118 185 IPR036047 GO:0005515
Trre1g05323 297 Gene3D - 101 157 - -
Trre1g05323 297 Pfam F-box-like 118 157 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05323 Trre-Chr1 59109973 59112975 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05323 - - tpra:123903739 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05323 1 59109973 59112975 Trre1g05323 1 59109973 59112975 ECH