Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05252 ATGTTTATCACCATTCTCCGATCATCAATTTTAACTCAATCAAAACCAAAATGTTTCATTCTCAAAAAACACTATTGTCTATGGTCAATGAAAAAAGACCCAGAATTAGAATCTGCACTATCACGTAATAGACGCTGGATAATCAACAATCAAATCAAAAACATTATCCTTCGTTACCCTAATAACCAAATCCCAATTGAAACTCTTCAGAAGAAATTCAAAACCCTAGATCTTCAAGGTAAAGCCCTAAATTGGATTTCTAAATACCCTTCTTGTTTCGATTTTCATCAACGTCATGTTCGTCTTACAAAACGCATCATTCAACTTGTTCATGAAGAACAATTCATTAAAGATTCTCTTGAACCTGTTTTTGTTAAGCGACTTGCCAAAATTCTCATGCTTTCGTTTAATAATACTCTTAATGTGCTCAAAATAAATGAGATTAAGAATAGTTTAGGGTTTCCTGATGATTATTTGATTAGGATTGTGCCGAAATATCCTGATTTGTTTCGAATCGTTAATGAGAGTGGGAGGAGGAGTTCTATGGCGATTGAATTGATTCATTGGAACCCTAATTTTGCTGTTTCGGAAGTTGAAGCTTTAGCGTTGAAGAACGGAGGAAAAGAACCGAAATTTTCGTGTTGTTTGCCTTCTAGTTGGGTGAAATCGTTGGACAAGTTTCGGGATTTTGAATCGGTTCCTTATGTTTCACCTTATTCGGATCCGAGAGGGTTGGTTCAAGGGTCGAAGGAAATGGAGAAGAGAAATGTGGGTTTGGTTCATGAGTTGTTGTCATTGACTCTTTGGAAGAAAGTTTCAATTATGAAATTGGGTCATTTTAAAAGGGAGTTTTTTTTGCCTGATAAGTTGAATGTGTTGTTGCTTAAGCATCCTGGGATTTTCTATGTTTCTAATAAGTATAGGATTTATACTGTTCTACTTAGAGAAGGGTATGTTGGGTCTCAATTAGTGGATAAGGATCCTCTTGTGGTTGTTAAGGAGAAATTTGGGGAAATTATGCAGGAAGGACTTCACGAGTATAACCAAAGGCGGCGTCATATTAATATCGAAAAGAAGAGAAGCAAAGGTCTTCCTTTGACTAGGGTGGATGAGGATCATATGAATGGTAGAAGAAGGAGAAGAAACAGGGAAGTTTCTGATGAAGATGATGAGGTTGGTGGAGAAAATGGTAATAAGTTGGGAGGGTTGCTTGATCCTGAAGAAAGGAAAAGGTTTTATAAAGTTCTTTTTGATGATGATGGTTCATGA 1269 0.3633 MFITILRSSILTQSKPKCFILKKHYCLWSMKKDPELESALSRNRRWIINNQIKNIILRYPNNQIPIETLQKKFKTLDLQGKALNWISKYPSCFDFHQRHVRLTKRIIQLVHEEQFIKDSLEPVFVKRLAKILMLSFNNTLNVLKINEIKNSLGFPDDYLIRIVPKYPDLFRIVNESGRRSSMAIELIHWNPNFAVSEVEALALKNGGKEPKFSCCLPSSWVKSLDKFRDFESVPYVSPYSDPRGLVQGSKEMEKRNVGLVHELLSLTLWKKVSIMKLGHFKREFFLPDKLNVLLLKHPGIFYVSNKYRIYTVLLREGYVGSQLVDKDPLVVVKEKFGEIMQEGLHEYNQRRRHINIEKKRSKGLPLTRVDEDHMNGRRRRRNREVSDEDDEVGGENGNKLGGLLDPEERKRFYKVLFDDDGS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05252 422 MobiDBLite consensus disorder prediction 370 395 - -
Trre1g05252 422 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 27 371 IPR045040 GO:0003723
Trre1g05252 422 Pfam Plant organelle RNA recognition domain 31 343 IPR021099 GO:0003723
Trre1g05252 422 MobiDBLite consensus disorder prediction 370 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05252 Trre-Chr1 58552058 58553326 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05252 - - gmx:100814115 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05252 1 58552058 58553326 Trre1g05252 1 58552058 58553326 ECH