Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05137 ATGCCTCTAATTATGAAGAACAACAATGTCCCTTTCTCTATTCCCACAATCTTTCTCTTCTTCACTCTCATTTTCATTCTCTTTCTCTCACTCTTCTTCTTCCCTTTCACTTCTTCCTCCACAAAAATCATCTCAAACCCTTCTCTTTTTCTTCAAACCTCCACCTCTTCCTCCATCAATGTCTACGTCGCCGACCTTCCCAGATCCCTCAACTACGGCCTCCTTAACCGTTACTGGTCCTTCAACTCCGATTCCCGAGTTGGCAGTGACTCAGATCGTGAAATTCGATCCACCAATTTGGGTAAAACCCTAGAATTTCCACCGTATCCGGAGAACCCAATTATCAAACAGTACAGTGCAGAGTACTGGATCATGGGGGATCTTATGACACCACGTGAATTACGAACTGGGTCGTTTGCAAAACGGGTTTTTGATGCACGTGATGCTGATGTGGTGTTTGTTCCTTTTTTTGCTACTATTAGTGCTGAATTGCAATTGGCTGTGGGTAAAGGTGTCTTTAGGAAGAAGGTTGGGAATGAGGATTATCAGAGACAGAGGGAGGTTATTGATTTTGTGAAGAAAACTAAAGCTTGGAATCGTTCTGGTGGTCGAGATCATGTGTTTGTTCTCACTGACCCGGTTGCAATGTGGCATGTTAAAGACGAGATTGCCCCGGCTATTCTCCTTGTTGTGGATTTTGGTGGGTGGTATAGACTTGACTCAAGATCACCCAACTGTAGCTCATCTGACATGATTCAACACACTCAAGTTTCTGTAATTAAAGACGTGATTGTGCCGTACACACATCTTCTACCCAAGTTACACTTGTCAGAAAATAAGGAACGCCGCAACCTTCTTTATTTTAAAGGAGCCAAACACAGGCACCGGGGAGGCCTAGTTAGAGAAAAGTTGTGGGATCTATTGACTAACGAGCCTGGTGTGATAATGGAGGAGGGCTTCCCTAATGCGACTGGTCGAGAGCAATCAATACAAGGGATGAGAACATCAGAGTTTTGCCTACATCCAGCTGGGGACACACCCACTTCATGCCGACTTTTTGATGCCATTCAAAGTCTTTGTATACCTGTTATTGTCAGCGACAACATTGAGCTCCCATTTGAAGGTATGGCGGACTATACAGAATTTTCGGTTTTTGTAGCAGTTGGTGATGCACTTAAACCAAGCTGGCTAGTCAATCATCTTCAGAGGTTTTCAAAACAACAGAAAGACAAGTTCCGACAAAACATGGCTAAGGTACAGCCCATGTTTGTATATGATAATGGTCATCCAGGTGGTATTGGCCCTATACCTTTGGATGGTGCAGTGAATCATATATGGAAGAAAGTACACGAAAAACTGCCAATGATAAAAGAAGCCATAATTCGAGAGAAAAGAAAACCACCTGGTGTGTTGGTTCCACGACGATGTCAATGTACTTAA 1440 0.434 MPLIMKNNNVPFSIPTIFLFFTLIFILFLSLFFFPFTSSSTKIISNPSLFLQTSTSSSINVYVADLPRSLNYGLLNRYWSFNSDSRVGSDSDREIRSTNLGKTLEFPPYPENPIIKQYSAEYWIMGDLMTPRELRTGSFAKRVFDARDADVVFVPFFATISAELQLAVGKGVFRKKVGNEDYQRQREVIDFVKKTKAWNRSGGRDHVFVLTDPVAMWHVKDEIAPAILLVVDFGGWYRLDSRSPNCSSSDMIQHTQVSVIKDVIVPYTHLLPKLHLSENKERRNLLYFKGAKHRHRGGLVREKLWDLLTNEPGVIMEEGFPNATGREQSIQGMRTSEFCLHPAGDTPTSCRLFDAIQSLCIPVIVSDNIELPFEGMADYTEFSVFVAVGDALKPSWLVNHLQRFSKQQKDKFRQNMAKVQPMFVYDNGHPGGIGPIPLDGAVNHIWKKVHEKLPMIKEAIIREKRKPPGVLVPRRCQCT 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05137 479 Pfam Exostosin family 57 400 IPR040911 -
Trre1g05137 479 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 57 423 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05137 Trre-Chr1 57588645 57591504 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05137 - - adu:107467786 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05137 1 57588645 57591504 Trre1g05137 1 57588645 57591504 ECH