Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05123 ATGAGGATTTTGGTTGTTTTCTGTATTGTTTCGTTGATCCACTTTTGCGGTGCTGAACCATTATCTGCAGATGGAACGGTATTGATACTCGACGAATCAAATTTCGATTCCGCCATTTCATCCTTCGATCATATCTTGGTTGATTTCTACGCTCCTTGGTGTGGTCACTGCAAGCGTCTCTCTCCCGAGTTAGATGCAGCTGCGCCTGTACTTGCAAACTTGAAGGAACCTATTGTCATAGCAAAAGTAGATGCAGACAAGCATACTCGCCTTGCAAGAAAATATGATGTTGATGCCTATCCAACTGTTTTGCTGTTTAACCATGGTATCCCTACAGAATACCGTGGACCAAGGAAAGCTGATGTACTTGTTCGTTATCTAAAGAAATTCGCTGCTTCTGATGTTACCGTTCTCGATTCAGATTCTGCTGTGAATAGTTTTGTTGAAGAAGCTGGCACTTTTTTTCCAGTATATATAGGTTTTGGGTTAGACAGTTCGGTTATAGAAAAGTTTGGCATAAAGTATAAGAAAAATGCATGGTTTTCTGTGGCAAAGGATTTTTCAGAGGATCTCATGGTAACATATGACTTTGATAAGATTCCTGCATTGGTTTCCCTTAATCCACTGTACAATGAGCGGAACACCTTTTACGGCCCCTTTGACGATGAATTTTTGGAAGCCTTTATAAAACAAAATCTCATTCCTTTGGCTGTGCCTGTATCCTATGAGACACTTAAGTTGATGAAAGCTGATGGTAGGAAAATAGTTTTGACTATTGTGGATGATGAAAGTGAAGAAAGTTCCAAAGAACTGGTTAAGTTATTGAAGGCTGCTGCATCTGCAAATCGCGACTTAATATTTGGTTATGTCGGAGTTAAACAGCTGGATGAATTTGCTGATAAATTCGATACCACTACTAAACTACCTAAAATGGTCATTTGGGATAAAAAAGATGATTATCTTTTGGTTGTTGGTTCAGAAAGCATTGAGGGAGAGGATCAAGGAACTCAAATCACAAAATTTCTAGAAGGATATAGAGAAGGAAGAACCATAAAGAAAACACTTAGTGGACCAACACTGATGCAATTTTTCCATAGATCTTTTGACATTAGATTTGTGTATATTATTGTTTTTATGATTGCAATGCTAATGCTTATTCAAACCTTAGGTAGTAAAGGAGGTGATGATGATCAATATCAAAAAGTACCAAACCAAGAAAAGGTTAATCAACCAAGTAGCTCAACCTCAGAAGGTGAAAGCAAAGAGTATAAAGAAGGTGACAAAGAAGATTAG 1293 0.3782 MRILVVFCIVSLIHFCGAEPLSADGTVLILDESNFDSAISSFDHILVDFYAPWCGHCKRLSPELDAAAPVLANLKEPIVIAKVDADKHTRLARKYDVDAYPTVLLFNHGIPTEYRGPRKADVLVRYLKKFAASDVTVLDSDSAVNSFVEEAGTFFPVYIGFGLDSSVIEKFGIKYKKNAWFSVAKDFSEDLMVTYDFDKIPALVSLNPLYNERNTFYGPFDDEFLEAFIKQNLIPLAVPVSYETLKLMKADGRKIVLTIVDDESEESSKELVKLLKAAASANRDLIFGYVGVKQLDEFADKFDTTTKLPKMVIWDKKDDYLLVVGSESIEGEDQGTQITKFLEGYREGRTIKKTLSGPTLMQFFHRSFDIRFVYIIVFMIAMLMLIQTLGSKGGDDDQYQKVPNQEKVNQPSSSTSEGESKEYKEGDKED 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05123 430 SUPERFAMILY Thioredoxin-like 21 130 IPR036249 -
Trre1g05123 430 Gene3D Glutaredoxin 222 359 - -
Trre1g05123 430 SUPERFAMILY Thioredoxin-like 232 358 IPR036249 -
Trre1g05123 430 PRINTS Thioredoxin family signature 53 62 - -
Trre1g05123 430 PRINTS Thioredoxin family signature 45 53 - -
Trre1g05123 430 PRINTS Thioredoxin family signature 96 107 - -
Trre1g05123 430 MobiDBLite consensus disorder prediction 403 417 - -
Trre1g05123 430 ProSitePatterns Thioredoxin family active site. 46 64 IPR017937 -
Trre1g05123 430 CDD PDI_a_family 28 127 - -
Trre1g05123 430 FunFam Protein disulfide-isomerase 5-2 16 131 - -
Trre1g05123 430 MobiDBLite consensus disorder prediction 392 430 - -
Trre1g05123 430 Pfam Thioredoxin-like domain 187 326 - -
Trre1g05123 430 Pfam Thioredoxin 27 129 IPR013766 -
Trre1g05123 430 PANTHER PROTEIN DISULFIDE ISOMERASE 7 353 - -
Trre1g05123 430 ProSiteProfiles Thioredoxin domain profile. 6 132 IPR013766 -
Trre1g05123 430 Gene3D Glutaredoxin 18 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05123 Trre-Chr1 57438339 57443426 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05123 K09580 - gmx:100791778 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05123 1 57438339 57443426 Trre1g05123 1 57438339 57443426 ECH