Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05100 ATGGCTCAGCAGAGGCAATCGGGAACGGAGAGGCTTGGGGTGAGACTGGGTTCTCACGATCTACATAACACCAATGGCTCCGGTGATCATGTTTCTGTTGCGATTCGCGGTGGTGTTTCTCATAAGCAGCAAAGGTTCCGGCGAATGGCGCGATCCGACAGAGGAGCGCGTTTTACGGTGGTTGCAATCTTAGTTTTTCTCTTCCTTGTACTTGTTGTCACTTTTCTGGCGTTTTCTTATATTTCTAGAGAAGAAATACATGAGAAGGTTGATGATACTGATGATGTAAAGAATGATTCTGATTTTCTTACAAATGTACCAAGAATAGAGAAGAAAGTTCTTGATTTTGGACATGCTTCTGGGGGACATGGCCGAGATTCGAGGTATTGGGATAAGGATGATAGAAGGAGGGATGGTGATTATGATGAGGATATGAAGGAGCAGATAAGTAGGGATCTTGGAGATGCAAATGCTGAAGATGGTGCTCGTGTAAAGACGAATCTCGAGATTAAGTCTTCTCAGGATGGTTCTTACAAAGGTGTAAAGCGGAAAGGTGTTGGCTTGTATAATGAAGCGGGGCGTCATGAATTGAAAAGGTATGAAGCAGAATACGAGGCCTCTTTGAAAAATGTGAGACATTCTGCTGAAGGTGATGGGAAATTGCCGCACGATGCTGATATGGAAAAGAAGAATGCAGCAGTTGACATTGATGACGAGTATGATGACTTTTTCGATGCTCATGATGGTCAAACGGAAGAGTCTACTGATAATGGAAATATGAGTGGGAAACATGTTAATTCTGATACACTAAGTTTGGACGATGAGGTTCAGAAAGAATCTCATGATTCTTTGGATAATGATGATATTGCTTCTGAGGAGGATATTGATAGGGAATCTTCCACTATTAACAAAAAAAAATCTCACGGCGGAAAAACAAATTCTAGACTGGCAAATACTGAAACAAAGAGGAAAGGCAAGCATCACAAACACTCAGGATCCTGTGAGATGAAGTTGTTAAACTCAACTTCACAACTTGTAGAACCACTAGAAAGTCGAAAATTTGCAAGGTTCAACTTACAATACACAGAGACAGAAGAGAAGCCACCGGGAGTAGAACAATGGCTGCCAAGATTTGCCGGCCATCAGAGCTTAGAAGAGAGAGAAAATTCATTTTTGGCACGTGATCAAAACATAAAATGTGGTTTTGTTAAAGGTCCTGAAGGTTCACCCAGCACTGGATTTGACATGTCAGAAGATGATGAAAGTTACATTAGCAGATGCCACATTGCTGTGATTTCATGCATATTTGGAAATTCTGACCGTTTGAGGACCCCAGCCACCAAAACGATCACTCGTTTGTCAAGGAAGAATGTCTGCTTTGTTATGTTTACTGATGAAGTTACAGTACGGACGCTTTCTTCTGAAGGCCATGCGCCTGATAGAATGGGTTTCATCGGCTTTTGGAAGTTAGTGGTAGTGAAGAATCTACCTTATGATGATATGCGGCGAGTGGGCAAAATACCAAAGTTATTGGCCCATCGACTTTTTCCCTTTGCAAGATATTCAATTTGGTTGGATAGCAAATTAAGGCTGCAGCTAGATCCTTTACTCATCTTGGAGCACTTTTTGTGGCGAAAGGGTTATGAATTTGCAATATCCAATCACTATGATCGGCACTGTGTGTGGGAAGAGGTGGTGCAAAACAAGAAATTGAACAAGTATAATCATACGGTTATAGATCAACAGTTTGCATTTTACCGGGCTGATGGACTCCAAAGATTTAATGCATCAGATCCAAACAAGCTTCTTCCAAGCAATGTACCAGAAGGTTCTTTTATTATTAGGGCACACACCCCTATGTCAAATTTGTTCAACTGTCTTTGGTTCAATGAAGTTGAACGATTTACTCCTCGTGATCAGCTGAGTTTTGCTTATACTTATCAGAAGCTGAGAAGGATGAATCCTGATAAACCTTTTCATCTTAATATGTTCAAGGACTGTGAAAGGAGACACATGGCGAAGTTGTTCCATCATAGGATGGACGAGAAGAGGGGTACACATCAAAAAGCAACCGAATAA 2079 0.4132 MAQQRQSGTERLGVRLGSHDLHNTNGSGDHVSVAIRGGVSHKQQRFRRMARSDRGARFTVVAILVFLFLVLVVTFLAFSYISREEIHEKVDDTDDVKNDSDFLTNVPRIEKKVLDFGHASGGHGRDSRYWDKDDRRRDGDYDEDMKEQISRDLGDANAEDGARVKTNLEIKSSQDGSYKGVKRKGVGLYNEAGRHELKRYEAEYEASLKNVRHSAEGDGKLPHDADMEKKNAAVDIDDEYDDFFDAHDGQTEESTDNGNMSGKHVNSDTLSLDDEVQKESHDSLDNDDIASEEDIDRESSTINKKKSHGGKTNSRLANTETKRKGKHHKHSGSCEMKLLNSTSQLVEPLESRKFARFNLQYTETEEKPPGVEQWLPRFAGHQSLEERENSFLARDQNIKCGFVKGPEGSPSTGFDMSEDDESYISRCHIAVISCIFGNSDRLRTPATKTITRLSRKNVCFVMFTDEVTVRTLSSEGHAPDRMGFIGFWKLVVVKNLPYDDMRRVGKIPKLLAHRLFPFARYSIWLDSKLRLQLDPLLILEHFLWRKGYEFAISNHYDRHCVWEEVVQNKKLNKYNHTVIDQQFAFYRADGLQRFNASDPNKLLPSNVPEGSFIIRAHTPMSNLFNCLWFNEVERFTPRDQLSFAYTYQKLRRMNPDKPFHLNMFKDCERRHMAKLFHHRMDEKRGTHQKATE 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05100 692 Coils Coil 190 210 - -
Trre1g05100 692 PANTHER ALKALINE CERAMIDASE-RELATED 44 684 IPR006852 -
Trre1g05100 692 MobiDBLite consensus disorder prediction 243 338 - -
Trre1g05100 692 MobiDBLite consensus disorder prediction 1 23 - -
Trre1g05100 692 Pfam Protein of unknown function (DUF616) 359 678 IPR006852 -
Trre1g05100 692 MobiDBLite consensus disorder prediction 268 285 - -
Trre1g05100 692 MobiDBLite consensus disorder prediction 120 143 - -
Trre1g05100 692 MobiDBLite consensus disorder prediction 253 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05100 Trre-Chr1 57191822 57197418 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05100 - - gmx:100810524 1062.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05100 1 57191822 57197418 Trre1g05100 1 57191822 57197418 ECH