Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05085 ATGAAACCAACAAATGTCATTGATGAATTGCTGAGCAACATCAACATTGCAGTTGTTGTGGCTATAGATGGCGGACTTATTACACCAGTGCTTCAGGATGCTGATAAGGTTGACGTCTATTCATTGTCAAGAAAGTGGAAGGAGTTAGTTGATAAGGCCCGGGCTAAGCAGTTGCAGCCTCATGAATACACCACAGGTACTATCAAGTCAAAGGGAGTTATTATGACAGCATTGCTTGCCAAGGCCACAGCACCCGCGCTGGCTAAACACCCTGTTATAAACTCTAGTTGTAGGGATGGTAATAGCTTTACATACAATAGCAGCATCAACATTGCAGTTGTTGTGGCTATAGATGGCGGACTTATTACACCAGTGCTTCAGGATGCTGATAAGGTGTTTGATACTCTATTTCGAGCTGCTTCTAATCGAACGTAA 435 0.4322 MKPTNVIDELLSNINIAVVVAIDGGLITPVLQDADKVDVYSLSRKWKELVDKARAKQLQPHEYTTGTIKSKGVIMTALLAKATAPALAKHPVINSSCRDGNSFTYNSSINIAVVVAIDGGLITPVLQDADKVFDTLFRAASNRT 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05085 144 Gene3D - 9 69 IPR023213 -
Trre1g05085 144 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 11 68 IPR045257 GO:0006086|GO:0045254
Trre1g05085 144 SUPERFAMILY CoA-dependent acyltransferases 11 68 - -
Trre1g05085 144 Gene3D - 70 136 IPR023213 -
Trre1g05085 144 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 11 68 IPR001078 GO:0016746
Trre1g05085 144 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 74 131 IPR001078 GO:0016746
Trre1g05085 144 SUPERFAMILY CoA-dependent acyltransferases 72 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05085 Trre-Chr1 57073929 57075078 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05085 12 68 Acyl Lipid Metabolism Gene Families AT1G34430 85.965 8.00e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05085 K00627 - rcu:8262738 111.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05085 1 57073929 57075078 Trre1g05085 1 57073929 57075078 ECH