Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03492 ATGGAAGTTACAAGTGCTGTTCATTCAGTTAGGTTTCTTCATTTGCAAACGCGCTTTTCACAACTTGAAAGACTTAACAACAACAACAACAACAATGGACCCTTGTTCATATCCACAAAAACCACAACACAAAATAAATATAATTCTCTTCTTCGTACAAACCAATTAAGCAGAAAAAACAATAGTGGTTATGGTCTTAACTATGGTTGTTACAGTAAAAGTGTTATCATCAACTCAACTTCTTCTGCTATTACTTCAGCTGAAACTTCTGGATCATTATCTGAAGTTGAAAAGATAAAGCAAAAATGTCTTAAGTGGAAGTGGAAGGATCAGTATTCAATAAACTATTTTGTTTCTTCTGATTCAGATTCTCCTCAGCTTAATCATCCTCCTCTGTTACTTGTTCATGGCTTTGGTGCTTCCATTCCTCACTGGCGTAGGAATATTAAGACATTGTCTCAGGATTATACTGTTTATGCTATTGATCTTCTTGGTTTTGGCCTGTCAGATAAGCCCCCAGGCTTTTCATATACCATGGAAACATGGGCTGAGTTGATCCTGGATTTCTTGGATGAAGTTGTTAAGAAGCCAACAGTACTAATAGGAAATTCTGTTGGAAGTCTTGCTTGTGTCATTGCAGCTGCTTCAGGCAATATCCAACCAGATTCAAGTCAAACACTAGTCAAAGGAATTGTGCTGTTAAATTGTTCTGGTGGCATGAACAACAAAGCTATTGTTGATGACTGGAGGATCAAGTTACTTCTACCATTGCTTTGGCTGATTGATTTTTTATTGAATCAAAAGGGAATTGCCTCCGCAATTTTCGAGCGTGTTAAACAAACAGAGAATTTGAGGAACATCTTGAGCTCAGTGTATGGAAATAAAGAGTCTGTGGATGATGAACTTGTGGAGATAATTAGGGAACCAGCAAATTCTGAAGGTGCCTTAGATGCATTTGTATCAATTGTAACAGGGCCACCAGGGCCTAATCCAGTTCAGTTGGTGCCAAAAATCTCCTTACCTATTTTACTTTTATGGGGAGATGAAGATCCATTTACTCCAATTGATGGACCTGTTGGTAAGTACTTTTCTTCATTGCCTTCTCAACAAGAAAATGTTAAACTTTTCTTACTTGAAGGAGTTGGACATTGTCCCCATGATGACAGACCTGAATTAGTCCATGATAAATTGCTACCTTGGCTAGCCACTCTTTCAAATCCATAG 1224 0.3783 MEVTSAVHSVRFLHLQTRFSQLERLNNNNNNNGPLFISTKTTTQNKYNSLLRTNQLSRKNNSGYGLNYGCYSKSVIINSTSSAITSAETSGSLSEVEKIKQKCLKWKWKDQYSINYFVSSDSDSPQLNHPPLLLVHGFGASIPHWRRNIKTLSQDYTVYAIDLLGFGLSDKPPGFSYTMETWAELILDFLDEVVKKPTVLIGNSVGSLACVIAAASGNIQPDSSQTLVKGIVLLNCSGGMNNKAIVDDWRIKLLLPLLWLIDFLLNQKGIASAIFERVKQTENLRNILSSVYGNKESVDDELVEIIREPANSEGALDAFVSIVTGPPGPNPVQLVPKISLPILLLWGDEDPFTPIDGPVGKYFSSLPSQQENVKLFLLEGVGHCPHDDRPELVHDKLLPWLATLSNP 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03492 407 FunFam Predicted protein 92 403 - -
Trre1g03492 407 SUPERFAMILY alpha/beta-Hydrolases 103 401 IPR029058 -
Trre1g03492 407 Gene3D alpha/beta hydrolase 87 403 IPR029058 -
Trre1g03492 407 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 61 403 - -
Trre1g03492 407 Pfam Alpha/beta hydrolase family 132 394 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03492 Trre-Chr1 31353822 31357012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03492 132 404 Miscellaneous Gene Families AT1G80280 24.483 2.80e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03492 - - gmx:100775473 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g03492 1 31353822 31357012 Trre1g03492 1 31353822 31357012 ECH