Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03489 ATGTCAGGCTCAAAAGATCCATTAGTGATATCATTTGGTGAGATGCTTATTGATTTTGTTCCTGACAAATCTGGTGTATCCTTGGCTGAGTCTTATGCTTTCATCAAAGCTCCTGGTGGTGCACCTGCCAATGTGGCTTGTGCTGTGTCCAAACTTGGTGGCAATGCTGCCTTCATTGGCAAGGTAGGGGATGATGAGTTTGGAAAGATGTTAGCTGACATCTTGAAGAAAAATGGGGTGAATACAGAAGGTGTTAGTTTTGACAAAGAGGCTAGAACAGCATTGGCTTTTGTGACATTGAGAAACGATGGAGAGAGGGAGTTCATGTTTTACAGAAACCCAAGTGCAGATATGTTACTGAAAGAATCTGAATTGAAAATGGATTTGATTAAGCAAGCAAAGATATTTCATTATGGATCTATTAGTCTTATTTCTGAGCCATGTAGATCTGCTCACATGGCTGCCATGAAAGCTGCTAGAGAAGCTGGTGCTTTGTTGTCTTATGATCCAAATGTGAGGTTGCCTCTGTGGCCTTCTGCTGATGCTGCTAGGTCTGGAATCAAAAGCATTTGGAATGAGGCTGATTTTATTAAGGTGAGTGATGATGAAGTTGAATTTCTTACACAAAAAGATTCTCAGAATGAAGATGCTGTTATGTCTCTGTGGCATGACAAGTTGAAGTTGCTTCTTGTTACTGATGGAGAGAAGGGTTGCAGATATGTCACTAAGAAATTTAAAGGAAAGGTAGGTGGATTTTCAGTGAGCCCAGTTGACACAACTGGTGCTGGTGATTCTTTTGTTGGTGCACTTCTCAAAGCTGTGGCCAAAGACCCTTCGATATTTGATAATGAACCAAAATTGAAAGAGGCTTTGTTATTTGCAAATGCTTGTGGAGCAATGTGTACAACACAGAAAGGAGCTATTCCTGCACTTCCAACTACTGAAGAGGCTCAGAAATTCATGTCCACCACCAAACCCAATTAA 984 0.4096 MSGSKDPLVISFGEMLIDFVPDKSGVSLAESYAFIKAPGGAPANVACAVSKLGGNAAFIGKVGDDEFGKMLADILKKNGVNTEGVSFDKEARTALAFVTLRNDGEREFMFYRNPSADMLLKESELKMDLIKQAKIFHYGSISLISEPCRSAHMAAMKAAREAGALLSYDPNVRLPLWPSADAARSGIKSIWNEADFIKVSDDEVEFLTQKDSQNEDAVMSLWHDKLKLLLVTDGEKGCRYVTKKFKGKVGGFSVSPVDTTGAGDSFVGALLKAVAKDPSIFDNEPKLKEALLFANACGAMCTTQKGAIPALPTTEEAQKFMSTTKPN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03489 327 FunFam Probable fructokinase-2 6 325 - -
Trre1g03489 327 Pfam pfkB family carbohydrate kinase 8 313 IPR011611 -
Trre1g03489 327 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 39 63 IPR002173 GO:0016301
Trre1g03489 327 CDD bac_FRK 8 308 - -
Trre1g03489 327 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 258 271 IPR002173 GO:0016301
Trre1g03489 327 SUPERFAMILY Ribokinase-like 9 321 IPR029056 -
Trre1g03489 327 PANTHER HEXOKINASE FAMILY MEMBER 8 320 - -
Trre1g03489 327 Gene3D - 5 326 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03489 Trre-Chr1 31346214 31349676 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03489 K00847 - gmx:100791294 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g03489 1 31346214 31349676 Trre1g03489 1 31346214 31349676 ECH