Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03483 ATGGTTGCTGCTACAATGGCATGTTCATCATGTTTCATGGTAGCAGTAGCGCCATGGAATTTGAAGTCACCACCAGCAACACTCTCTTCTACGCACAAATTCAAATTCAAATGTTATGCGACAACACAACAACAGTCTTTAGTGCACAACGACGACCTTCAAGCTCTCTTACATATTCTTCCTTCCGATTTGCATTACAATCTCCTCAATCAACCAAATCGCCCTCAACTTTTGGAGGTTATATTGGATTTAGGCCGTTTTCCCGAAGCTCGTTATCTCGGCAAACACGGAAACCACTATCTAAGAAATTCTGAGGTAACTGTGAAAGAGTTGGAATATGCTGAAGAAGCTGTTGGAGATTTTGGGAAGGATAATAGAGCTGGTATTGAAGGTACTTTGCACAGAATATCAGCAATAAGGAGTAGGAATGGTGGCATTGTTGGTTTGACGTGTCGAATTGGGAGGGCTGTCACTGGCCATATTGACATGGTTTATGATCTGCTTCAATATGGCAAGAGCATTTTATTTGTTGGAAGGCCTGGCGTTGGCAAGACTACTGTTATGAGAGAGATTGCTCGCGTACTGTCAGATGAATTTCACAAAAGAGTGGTCATTGTTGATACCAGTAATGAAATTGGAGGCGATGGGAATATTCCTCATGCAGCAATAGGTGGTGCACGGAGAATGCAAGTGCCCATGCCATCAATGCAACATAGCGTGATGATTGAGGCAGTAGAAAATCACATGCCTGAGGTGATTATAGTAGATGAAATTGGCACAGAAGCTGAAGCTCATGCTTGCCGGTCAATTGCAGAGCGAGGCATCATGCTTATAGGGACTGCTCATGGACAGCAGATTGATAATGTCATGAAGAATCCTACACTCTCTGACCTGATTGGTGGAATTGAAAGTGTTACTCTGGGAGACGTTGAAGCCAGAGCAAGAAAATGTCAGAAAACTATTCTTGAGAGGAAAGCTCCTCCAACATTTGATTTCTTGATTGAGATGAGAGACAGACACTACTGGATTACTCATCAAACTGACAAAAGCGTAGATATGTTGCTTCGAGGCAAGATCCCACAGGTCGAGGTAAGAAAAAGAGATGAAAACAGCAAGGTTGTGATCGAAAAATCTAAAGCATACGATAAATGCCAAGTTTGA 1161 0.4255 MVAATMACSSCFMVAVAPWNLKSPPATLSSTHKFKFKCYATTQQQSLVHNDDLQALLHILPSDLHYNLLNQPNRPQLLEVILDLGRFPEARYLGKHGNHYLRNSEVTVKELEYAEEAVGDFGKDNRAGIEGTLHRISAIRSRNGGIVGLTCRIGRAVTGHIDMVYDLLQYGKSILFVGRPGVGKTTVMREIARVLSDEFHKRVVIVDTSNEIGGDGNIPHAAIGGARRMQVPMPSMQHSVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGIMLIGTAHGQQIDNVMKNPTLSDLIGGIESVTLGDVEARARKCQKTILERKAPPTFDFLIEMRDRHYWITHQTDKSVDMLLRGKIPQVEVRKRDENSKVVIEKSKAYDKCQV 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03483 386 PANTHER KINASE-RELATED 41 373 - -
Trre1g03483 386 SMART AAA_5 170 326 IPR003593 GO:0016887
Trre1g03483 386 CDD AAA 165 260 - -
Trre1g03483 386 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 314 IPR027417 -
Trre1g03483 386 Pfam Sporulation stage III, protein AA 152 299 IPR045735 -
Trre1g03483 386 Gene3D - 152 301 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03483 Trre-Chr1 31285593 31288869 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03483 - - gmx:100817880 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g03483 1 31285593 31288869 Trre1g03483 1 31285593 31288869 ECH