Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03476 ATGGCTTGTTGGTCCGCAGAAAATGCCACAAAGGCCTATCTTAGCACTTTGAAAATGGGTCAAAAAGCCATAGAACCAAATGTAGCTGAATTTATATCAGCACTAGCTGCAGGAAACAATGCACAAATGATGATTGTAGCATGTGCTACAAAAGCAGATTCTACAACACTAGCTTTAGTTGCTGCTGCTAATCAAACTGGTGGACAAGTAATTTGTATTGTCCCTAACCAAAAAGATTTAATTGCATCCAAAAAAGCTTTAGGAATTGCTTCTAATCAAGTTCAATTCATGGTGGGAGAAGCAAAAGAAGTACTTTTGTTAGACCAATTTGAAGCAGCTGATTTTTTGCTTATTGATTGTAACATTAAAAATCATGAAGATATTCTTAAAACAATTCAAAATGGTAGGTTTCAAAATGGTGGTACAATTGTTGTGGGGTATAATGCATTTAATTGTAAAGGGTCATGGTTATCATCATGTGGATCAAAGACTCAACTTTTACCTATTGGAGAAGGACTTTTAGTCACAAGATTTGGAATGAATGATAATAGTCCAAAGTATGGAACAAGTAGATCAATGGGGAAGATGAAAAGTCGTTGGGTTGTTAAGGTTGATAAATGCACAGGTGAGGAACATGTGTTTAGGGTTAGACACCCTCATGGGAAAGTTATTCAAACTTGA 681 0.3583 MACWSAENATKAYLSTLKMGQKAIEPNVAEFISALAAGNNAQMMIVACATKADSTTLALVAAANQTGGQVICIVPNQKDLIASKKALGIASNQVQFMVGEAKEVLLLDQFEAADFLLIDCNIKNHEDILKTIQNGRFQNGGTIVVGYNAFNCKGSWLSSCGSKTQLLPIGEGLLVTRFGMNDNSPKYGTSRSMGKMKSRWVVKVDKCTGEEHVFRVRHPHGKVIQT 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03476 226 Gene3D Vaccinia Virus protein VP39 5 179 IPR029063 -
Trre1g03476 226 PANTHER DUF1442 FAMILY PROTEIN 3 215 IPR009902 -
Trre1g03476 226 Pfam Protein of unknown function (DUF1442) 3 215 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03476 Trre-Chr1 31253766 31254558 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03476 - - gmx:100775961 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g03476 1 31253766 31254558 Trre1g03476 1 31253766 31254558 ECH